Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01377 | Sorghum | cytosol | 83.44 | 88.51 |
| Os01t0719600-01 | Rice | cytosol | 73.89 | 81.69 |
| Zm00001d011731_P001 | Maize | extracellular | 76.43 | 81.08 |
| TraesCS3D01G288100.1 | Wheat | cytosol | 71.34 | 78.32 |
| TraesCS3B01G322900.1 | Wheat | cytosol | 71.34 | 78.32 |
| TraesCS3A01G288300.1 | Wheat | cytosol | 71.34 | 78.32 |
| HORVU3Hr1G068200.1 | Barley | cytosol | 70.7 | 77.62 |
| GSMUA_Achr1P14500_001 | Banana | cytosol | 53.5 | 62.22 |
| VIT_11s0016g04220.t01 | Wine grape | cytosol | 50.96 | 59.7 |
| KRH60302 | Soybean | cytosol, extracellular | 47.77 | 56.82 |
| KRH48431 | Soybean | cytosol | 48.41 | 56.3 |
| KRH41596 | Soybean | cytosol | 46.5 | 55.3 |
| KRH39252 | Soybean | cytosol | 47.13 | 54.81 |
| GSMUA_Achr8P26110_001 | Banana | cytosol | 53.5 | 53.5 |
| AT3G24450.1 | Thale cress | cytosol | 46.5 | 52.14 |
| CDX94814 | Canola | cytosol | 44.59 | 50.0 |
| Bra001948.1-P | Field mustard | cytosol | 44.59 | 50.0 |
| PGSC0003DMT400001032 | Potato | cytosol | 45.22 | 47.65 |
| Zm00001d011274_P001 | Maize | mitochondrion | 37.58 | 44.03 |
| CDY69094 | Canola | cytosol | 31.21 | 43.75 |
| Zm00001d031132_P002 | Maize | cytosol | 20.38 | 38.1 |
| Zm00001d016691_P001 | Maize | extracellular | 21.02 | 29.46 |
| Zm00001d034634_P001 | Maize | plastid | 38.22 | 28.57 |
| Zm00001d012973_P001 | Maize | plastid | 37.58 | 27.96 |
| Zm00001d050277_P001 | Maize | mitochondrion | 24.2 | 20.0 |
| Zm00001d038419_P001 | Maize | cytosol | 24.2 | 16.74 |
| Zm00001d040839_P001 | Maize | nucleus | 35.03 | 16.47 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | UniProt:A0A1D6NDM7 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| ProteinID:ONM38592.1 | PFAM:PF00403 | PFscan:PS50846 | PFscan:PS51257 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF169 |
| SUPFAM:SSF55008 | UniParc:UPI00022128F5 | EnsemblPlantsGene:Zm00001d043615 | EnsemblPlants:Zm00001d043615_P001 | EnsemblPlants:Zm00001d043615_T001 | SEG:seg |
Description
Metal ion binding protein
Coordinates
chr3:+:205274303..205276402
Molecular Weight (calculated)
17049.7 Da
IEP (calculated)
6.501
GRAVY (calculated)
-0.069
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRKLGLDRV LDCFSLSLCS SACACVHSVE EEEQEDEDER KALVSSQLEE LVKLSRDLVG GAAKTLAFHL EPKTVELKVS MHCYGCAKKV QKHISKMDGV
101: TSFEVDLEKK KVVVIGDVTP YEVLASISKV KFAELWVAPQ QPQAASRCGK APAGGVV
101: TSFEVDLEKK KVVVIGDVTP YEVLASISKV KFAELWVAPQ QPQAASRCGK APAGGVV
001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP
Arabidopsis Description
Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.