Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G216100.1 | Wheat | cytosol | 96.9 | 82.78 |
| OQU87104 | Sorghum | cytosol, mitochondrion | 61.24 | 60.77 |
| Os01t0595201-00 | Rice | cytosol | 60.47 | 59.54 |
| Zm00001d011274_P001 | Maize | mitochondrion | 58.91 | 56.72 |
| TraesCS3B01G322900.1 | Wheat | cytosol | 44.19 | 39.86 |
| TraesCS1B01G371000.1 | Wheat | cytosol, mitochondrion | 42.64 | 37.67 |
| TraesCS7B01G247000.1 | Wheat | cytosol | 21.71 | 36.36 |
| TraesCS7B01G338200.1 | Wheat | cytosol | 18.6 | 22.43 |
| TraesCS1B01G292800.1 | Wheat | cytosol | 31.01 | 21.51 |
| TraesCS5B01G488200.1 | Wheat | plastid | 31.78 | 19.43 |
| TraesCS3B01G593700.1 | Wheat | plastid | 32.56 | 13.68 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G244200.1 | EnsemblPlantsGene:TraesCS3B01G244200 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF102 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg | SUPFAM:SSF55008 |
| TIGR:cd00371 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:386374938..386375501
Molecular Weight (calculated)
14323.5 Da
IEP (calculated)
9.796
GRAVY (calculated)
-0.328
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLNKALRWL PRSSASPRLE EDEDNNERNG LLRSHRDQNR VVPVTGLHVD EQPEAGAHVE PKTVALKVSM HCHGCARKVE KQISKLHGVV SIRIELGMKT
101: VTVVGNVTPM QVLETVSKVI KYAHILPLP
101: VTVVGNVTPM QVLETVSKVI KYAHILPLP
001: MGKLQKIGRV WDCLFLPTNQ CSCFCLNTLG DEEEEFEKEP LIDSSTEKSG KVMRLKDVVA ADHRQTLAFH LKPKIVELKV SMHCYGCAKK VEKHISKLDG
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP
101: VTWYKVELES KKVVVKGNIL PVDVLESICK VKNAQLWSSP
Arabidopsis Description
Heavy metal transport/detoxification superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LHF4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.