Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G526400.1 | Wheat | cytosol, mitochondrion, plastid | 93.16 | 94.08 |
| TraesCS3D01G531500.1 | Wheat | mitochondrion, plastid | 92.83 | 94.06 |
| HORVU3Hr1G114920.1 | Barley | cytosol | 85.99 | 73.54 |
| Os01t0976300-01 | Rice | mitochondrion, plastid | 40.07 | 60.29 |
| TraesCS7B01G247000.1 | Wheat | cytosol | 13.03 | 51.95 |
| Zm00001d040839_P001 | Maize | nucleus | 52.12 | 47.9 |
| TraesCS5B01G488200.1 | Wheat | plastid | 31.92 | 46.45 |
| EES02979 | Sorghum | mitochondrion, nucleus | 48.86 | 45.87 |
| TraesCS1B01G371000.1 | Wheat | cytosol, mitochondrion | 20.2 | 42.47 |
| TraesCS3B01G322900.1 | Wheat | cytosol | 17.59 | 37.76 |
| TraesCS3B01G244200.1 | Wheat | mitochondrion | 13.68 | 32.56 |
| TraesCS1B01G292800.1 | Wheat | cytosol | 19.54 | 32.26 |
| TraesCS7B01G338200.1 | Wheat | cytosol | 10.75 | 30.84 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G593700.1 | EnsemblPlantsGene:TraesCS3B01G593700 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF130 | PFAM:PF00403 | PFscan:PS50846 | SEG:seg | SUPFAM:SSF55008 |
| TIGR:cd00371 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:817331244..817332167
Molecular Weight (calculated)
32089.8 Da
IEP (calculated)
10.780
GRAVY (calculated)
-0.479
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLLLKGVH KRLGLPSISI SCSSAEATNI IASTTTTNGV GSSSGRALDR HSPRLRDPHR SSTSKPPRPS TSASAKDSAS SGDSKQQRGH GNNKKKKNKS
101: TTAPAGTKSS EKRLVSPATS SRFLLNSSRL QSDDLDVLAL APPPPPSFID VFPGGEGKPP SFIDAFPPGN ASLPLSFAKE APSPVQQAET SSSSSSASSS
201: SEITALQEEE EQQKAAVLAR SSTTTERRTT QVVVLRVSLH CKGCAGKVKK HLAKMEGVTS FDIDIPSKKV TVVGDVTPLG VLTSVSKVKP AQFWPSPPQP
301: PRASASF
101: TTAPAGTKSS EKRLVSPATS SRFLLNSSRL QSDDLDVLAL APPPPPSFID VFPGGEGKPP SFIDAFPPGN ASLPLSFAKE APSPVQQAET SSSSSSASSS
201: SEITALQEEE EQQKAAVLAR SSTTTERRTT QVVVLRVSLH CKGCAGKVKK HLAKMEGVTS FDIDIPSKKV TVVGDVTPLG VLTSVSKVKP AQFWPSPPQP
301: PRASASF
001: MLCASQASTT TLCSTMDQTS QPSSSSSATI RLGGRAIDRH NPIIRDGRRL TPPPSPNLNP SSSSSSTYHT PLMTRLGLES SEQKRLAKRK SKKGDSDVGK
101: SPVSCFSSDT PQGSSRYLLS NPVFFDGFVD SDPIPIPIDE PEITKADDLN NFHEDRLIIN ASKYLSTSAS FLEKKQPDFF EGFLDYEPVL SPDNPFSEPT
201: KASPTASLSS LEDKDVSSPD FKFSPPPPPP PSPPQSSPPS PPEKNSSSDQ VVVLRVSLHC KGCAGKVKKH LSKLKGVTSY NIDFAAKKVT VTGDVTPLTV
301: LASISKVKNA QFWPEIIQK
101: SPVSCFSSDT PQGSSRYLLS NPVFFDGFVD SDPIPIPIDE PEITKADDLN NFHEDRLIIN ASKYLSTSAS FLEKKQPDFF EGFLDYEPVL SPDNPFSEPT
201: KASPTASLSS LEDKDVSSPD FKFSPPPPPP PSPPQSSPPS PPEKNSSSDQ VVVLRVSLHC KGCAGKVKKH LSKLKGVTSY NIDFAAKKVT VTGDVTPLTV
301: LASISKVKNA QFWPEIIQK
Arabidopsis Description
NAKR1Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDS4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.