Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52751 | Canola | cytosol | 95.06 | 92.4 |
| Bra003142.1-P | Field mustard | cytosol, plastid | 93.42 | 91.16 |
| CDY67353 | Canola | cytosol, plastid | 83.54 | 79.61 |
| CDX73547 | Canola | cytosol, plastid | 82.72 | 79.45 |
| AT3G53530.2 | Thale cress | cytosol, plastid | 75.31 | 73.79 |
| CDX74966 | Canola | cytosol | 58.02 | 51.84 |
| CDX91358 | Canola | cytosol | 57.61 | 51.66 |
| CDY18449 | Canola | cytosol | 55.56 | 50.37 |
| CDX93383 | Canola | cytosol | 54.32 | 49.62 |
| CDY08589 | Canola | cytosol, plastid | 14.81 | 47.37 |
| CDY00957 | Canola | cytosol, plastid | 14.4 | 46.05 |
| CDY04920 | Canola | cytosol, plastid | 14.4 | 45.45 |
| CDY55410 | Canola | cytosol | 21.81 | 41.73 |
| GSMUA_Achr9P03120_001 | Banana | plastid | 36.21 | 39.64 |
| GSMUA_Achr4P30560_001 | Banana | plastid | 31.28 | 39.38 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 27.57 | 38.07 |
| GSMUA_Achr2P16130_001 | Banana | mitochondrion, plastid | 33.33 | 37.85 |
| GSMUA_Achr6P34370_001 | Banana | plastid | 34.16 | 37.39 |
| Zm00001d034634_P001 | Maize | plastid | 31.69 | 36.67 |
| GSMUA_Achr7P15330_001 | Banana | plastid | 32.1 | 36.62 |
| KRH19750 | Soybean | plastid | 41.56 | 36.59 |
| Zm00001d012973_P001 | Maize | plastid | 31.69 | 36.49 |
| Os03t0819400-01 | Rice | plastid | 30.45 | 36.45 |
| VIT_08s0040g02700.t01 | Wine grape | cytosol, plastid | 39.92 | 35.93 |
| EER90630 | Sorghum | plastid | 31.28 | 35.68 |
| KRH32346 | Soybean | plastid | 40.74 | 35.36 |
| TraesCS5A01G475200.1 | Wheat | plastid | 30.04 | 34.93 |
| HORVU5Hr1G112560.1 | Barley | plastid | 29.63 | 34.78 |
| KRG95861 | Soybean | plastid | 41.15 | 34.48 |
| KRH67578 | Soybean | plastid | 41.15 | 34.48 |
| GSMUA_Achr7P10400_001 | Banana | plastid | 30.04 | 34.43 |
| TraesCS5B01G488200.1 | Wheat | plastid | 29.63 | 34.12 |
| PGSC0003DMT400045359 | Potato | cytosol | 40.74 | 33.0 |
| Solyc10g085910.1.1 | Tomato | nucleus | 40.33 | 33.0 |
| CDY68400 | Canola | plastid | 37.45 | 31.27 |
| CDY14145 | Canola | cytosol, mitochondrion, peroxisome, plastid | 14.4 | 29.66 |
| CDY71670 | Canola | cytosol | 12.76 | 29.52 |
| CDX72154 | Canola | cytosol | 12.76 | 29.52 |
| CDY04859 | Canola | cytosol | 36.63 | 29.18 |
| CDX77196 | Canola | plastid | 30.45 | 27.92 |
| CDY31723 | Canola | plastid | 30.04 | 27.55 |
| CDY10437 | Canola | cytosol, plastid | 34.57 | 26.5 |
| CDX94814 | Canola | cytosol | 15.23 | 26.43 |
| CDX67640 | Canola | cytosol | 13.17 | 25.4 |
| CDX76052 | Canola | cytosol | 13.17 | 23.19 |
| CDY55409 | Canola | nucleus | 13.58 | 22.76 |
| Zm00001d038419_P001 | Maize | cytosol | 19.75 | 21.15 |
| CDY69094 | Canola | cytosol | 8.64 | 18.75 |
| CDY43346 | Canola | cytosol | 12.76 | 18.24 |
| CDY32007 | Canola | plastid | 13.58 | 17.84 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | GO:A0A078F7H1 | UniProt:A0A078F7H1 | EnsemblPlants:CDY07583 | ProteinID:CDY07583 |
| ProteinID:CDY07583.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0030001 |
| GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00124669001 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 | InterPro:NAKR2/3 |
| PFAM:PF00403 | PIRSF:PIRSF011221 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF82 | SUPFAM:SSF55008 |
| UniParc:UPI0004EE9EAD | : | : | : | : | : |
Description
BnaC06g14810DBnaC06g14810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7H1]
Coordinates
chrLK031979:-:896120..898867
Molecular Weight (calculated)
25800.6 Da
IEP (calculated)
9.548
GRAVY (calculated)
-0.370
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MFCASQASTA TASHDERSVA AIDRHNPIIK DGRRSFAAPC SSGDDYIAPY RQLSKVTRIP SSGEEKMIQV LEKGRKSTSG SLLKLSVNIS LARKSFGCVA
101: GPACDVTEST PPGSTRYLLG SEPVSSGKDT VVTEEGEPSL AKRGSGAADE EKKMTSSGSD QASKVVVLRV SLRCNCRGCQ GKVKKHLSRM QGVTSFSIDF
201: VSKKVTVTGD VTPLEVLGFL SKVKNAQFWT PPPSSLPSAN PEN
101: GPACDVTEST PPGSTRYLLG SEPVSSGKDT VVTEEGEPSL AKRGSGAADE EKKMTSSGSD QASKVVVLRV SLRCNCRGCQ GKVKKHLSRM QGVTSFSIDF
201: VSKKVTVTGD VTPLEVLGFL SKVKNAQFWT PPPSSLPSAN PEN
001: MKAGMFYCAS QASTATANGE RTVTARAIDR HNPIIKDGRR SFTAPCSSGD DYVAPYRQLS KITRVPSSSG DGKSVQVDKG RRSNSGSLMK LISYDVSLAR
101: KSFGCVVATP KTPPGSTRYL LGSDPVSLAG STGQDTVATE ESEASAPKRG SSGPVEEKKK SSGSGSDQVV VLRVSLHCHC RGCQGKVKKH LSKMQGVTSF
201: NIDFASKKVT VTGDITPLEV LGCLSKVKNA QFWTPPPPSI PRANPET
101: KSFGCVVATP KTPPGSTRYL LGSDPVSLAG STGQDTVATE ESEASAPKRG SSGPVEEKKK SSGSGSDQVV VLRVSLHCHC RGCQGKVKKH LSKMQGVTSF
201: NIDFASKKVT VTGDITPLEV LGCLSKVKNA QFWTPPPPSI PRANPET
Arabidopsis Description
NAKR3Chloroplast-targeted copper chaperone protein [Source:TAIR;Acc:AT3G53530]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.