Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- golgi 3
- extracellular 3
- plastid 2
- mitochondrion 1
- cytosol 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00957 | Canola | cytosol, plastid | 66.04 | 92.11 |
| Bra029854.1-P | Field mustard | cytosol, plastid | 65.09 | 90.79 |
| CDY08589 | Canola | cytosol, plastid | 65.09 | 90.79 |
| TraesCS7B01G247000.1 | Wheat | cytosol | 59.43 | 81.82 |
| TraesCS7D01G342900.1 | Wheat | cytosol | 59.43 | 81.82 |
| Os08t0205400-01 | Rice | extracellular, plasma membrane | 58.49 | 76.54 |
| Zm00001d031132_P002 | Maize | cytosol | 58.49 | 73.81 |
| EES17440 | Sorghum | cytosol, plastid | 59.43 | 72.41 |
| GSMUA_Achr6P07500_001 | Banana | cytosol, plastid | 57.55 | 54.46 |
| AT3G56240.1 | Thale cress | cytosol | 54.72 | 47.93 |
| TraesCS7A01G335400.1 | Wheat | cytosol | 63.21 | 40.12 |
| AT3G24450.1 | Thale cress | cytosol | 23.58 | 17.86 |
| AT3G53530.2 | Thale cress | cytosol, plastid | 33.02 | 14.11 |
| AT2G37390.1 | Thale cress | cytosol | 28.3 | 11.58 |
| AT2G28660.1 | Thale cress | plastid | 27.36 | 10.94 |
| AT5G02600.1 | Thale cress | plastid | 31.13 | 10.34 |
Protein Annotations
| MapMan:25.5.2.3 | Gene3D:3.30.70.100 | EntrezGene:842940 | ArrayExpress:AT1G66240 | EnsemblPlantsGene:AT1G66240 | RefSeq:AT1G66240 |
| TAIR:AT1G66240 | RefSeq:AT1G66240-TAIR-G | EnsemblPlants:AT1G66240.1 | TAIR:AT1G66240.1 | Symbol:ATX1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006825 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0030001 | GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | PFAM:PF00403 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50846 | PANTHER:PTHR22814 | PANTHER:PTHR22814:SF172 | SUPFAM:SSF55008 |
| UniParc:UPI000009FD7D | : | : | : | : | : |
Description
ATX1homolog of anti-oxidant 1 [Source:TAIR;Acc:AT1G66240]
Coordinates
chr1:-:24686114..24687417
Molecular Weight (calculated)
11430.9 Da
IEP (calculated)
8.205
GRAVY (calculated)
0.017
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKDLFQAVS YQNTASLSLF QALSVVESKA MSQTVVLRVA MTCEGCVGAV KRVLGKMEGV ESFDVDIKEQ KVTVKGNVQP DAVLQTVTKT GKKTAFWEAE
101: GETAKA
101: GETAKA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.