Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- golgi 3
- extracellular 3
- cytosol 3
- vacuole 2
- plasma membrane 2
- mitochondrion 2
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71670 | Canola | cytosol | 80.17 | 92.38 |
| Bra007230.1-P | Field mustard | cytosol, plastid | 80.17 | 91.51 |
| CDX72154 | Canola | cytosol | 79.34 | 91.43 |
| CDX67640 | Canola | cytosol | 95.04 | 91.27 |
| Bra003234.1-P | Field mustard | cytosol, plastid | 91.74 | 87.4 |
| CDX76052 | Canola | cytosol | 88.43 | 77.54 |
| VIT_13s0074g00770.t01 | Wine grape | cytosol | 52.07 | 73.26 |
| PGSC0003DMT400050141 | Potato | cytosol, plastid | 61.98 | 70.75 |
| KRH34745 | Soybean | endoplasmic reticulum | 46.28 | 69.14 |
| Solyc11g007200.1.1 | Tomato | extracellular | 63.64 | 68.14 |
| Bra014702.1-P | Field mustard | cytosol | 88.43 | 64.85 |
| CDY43346 | Canola | cytosol | 88.43 | 62.94 |
| CDY32007 | Canola | plastid | 94.21 | 61.62 |
| AT1G66240.1 | Thale cress | cytosol, plastid | 47.93 | 54.72 |
| KRG92037 | Soybean | cytosol | 44.63 | 43.9 |
| AT3G24450.1 | Thale cress | cytosol | 19.83 | 17.14 |
| AT3G53530.2 | Thale cress | cytosol, plastid | 27.27 | 13.31 |
| AT2G37390.1 | Thale cress | cytosol | 27.27 | 12.74 |
| AT2G28660.1 | Thale cress | plastid | 24.79 | 11.32 |
| AT5G02600.1 | Thale cress | plastid | 24.79 | 9.4 |
Protein Annotations
| MapMan:25.5.2.3 | Gene3D:3.30.70.100 | EntrezGene:824790 | UniProt:A0A178V898 | ProteinID:AEE79500.1 | EMBL:AF361860 |
| ProteinID:ANM64077.1 | ArrayExpress:AT3G56240 | EnsemblPlantsGene:AT3G56240 | RefSeq:AT3G56240 | TAIR:AT3G56240 | RefSeq:AT3G56240-TAIR-G |
| EnsemblPlants:AT3G56240.1 | TAIR:AT3G56240.1 | EMBL:AY066056 | EMBL:AY085657 | ProteinID:CAB87423.1 | Symbol:CCH |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006825 | GO:GO:0006878 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009987 | GO:GO:0016531 | GO:GO:0019725 | GO:GO:0019904 | GO:GO:0030001 | GO:GO:0046686 |
| GO:GO:0046872 | GO:GO:0046914 | GO:GO:0048046 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| RefSeq:NP_001326128.1 | RefSeq:NP_191183.1 | UniProt:O82089 | ProteinID:OAP02457.1 | PFAM:PF00403 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005417 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50846 | PANTHER:PTHR22814 |
| PANTHER:PTHR22814:SF271 | SUPFAM:SSF55008 | EMBL:U88711 | UniParc:UPI00000A3CAD | SEG:seg | : |
Description
CCHCopper transport protein CCH [Source:UniProtKB/Swiss-Prot;Acc:O82089]
Coordinates
chr3:-:20863139..20864622
Molecular Weight (calculated)
12971.3 Da
IEP (calculated)
4.601
GRAVY (calculated)
-0.510
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQTVVLKVG MSCQGCVGAV NRVLGKMEGV ESFDIDIKEQ KVTVKGNVEP EAVFQTVSKT GKKTSYWPVE AEAEPKAEAD PKVETVTETK TEAETKTEAK
101: VDAKADVEPK AAEAETKPSQ V
101: VDAKADVEPK AAEAETKPSQ V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.