Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G335400.1 | |
| TraesCS7B01G247000.1 | |
| TraesCS7D01G342900.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G44790.1 | TraesCS7A01G335400.1 | AT1G66240.1 | 17223078 |
| AT5G44790.1 | TraesCS7B01G247000.1 | AT1G66240.1 | 17223078 |
| AT5G44790.1 | TraesCS7D01G342900.1 | AT1G66240.1 | 17223078 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G382300.1 | Wheat | cytosol | 98.4 | 98.4 |
| TraesCS7A01G480100.1 | Wheat | cytosol | 98.0 | 98.0 |
| HORVU7Hr1G108890.1 | Barley | cytosol, mitochondrion | 93.21 | 91.2 |
| Os06t0665800-01 | Rice | cytosol | 88.91 | 88.73 |
| KXG20553 | Sorghum | plasma membrane | 89.01 | 88.48 |
| Zm00001d011553_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 15.28 | 83.61 |
| TraesCS6D01G146500.1 | Wheat | cytosol | 82.72 | 82.97 |
| Zm00001d027860_P001 | Maize | plasma membrane | 13.59 | 80.95 |
| Zm00001d046953_P002 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 83.22 | 80.56 |
| GSMUA_Achr5P26800_001 | Banana | cytosol | 72.73 | 77.78 |
| GSMUA_Achr8P06970_001 | Banana | cytosol | 73.33 | 77.75 |
| CDY67984 | Canola | cytosol, peroxisome, plasma membrane | 17.98 | 73.47 |
| VIT_01s0011g01360.t01 | Wine grape | cytosol | 70.03 | 70.1 |
| KRH37212 | Soybean | cytosol | 67.43 | 68.46 |
| KRH58516 | Soybean | cytosol | 67.93 | 68.41 |
| Solyc02g068490.2.1 | Tomato | cytosol | 68.13 | 68.0 |
| KRH42397 | Soybean | cytosol | 67.43 | 67.91 |
| KRH12191 | Soybean | cytosol | 67.53 | 67.87 |
| PGSC0003DMT400024409 | Potato | cytosol | 67.93 | 67.86 |
| AT5G44790.1 | Thale cress | cytosol | 67.53 | 67.53 |
| CDY50771 | Canola | cytosol | 66.83 | 67.3 |
| CDY39400 | Canola | cytosol | 66.83 | 66.97 |
| Bra025102.1-P | Field mustard | cytosol | 66.23 | 66.5 |
| Bra027573.1-P | Field mustard | cytosol | 65.03 | 64.97 |
| CDY26408 | Canola | golgi, nucleus, plasma membrane | 11.09 | 64.16 |
| CDY69037 | Canola | cytosol | 34.97 | 59.93 |
| CDY67659 | Canola | cytosol | 35.06 | 58.99 |
| TraesCS2D01G407800.5 | Wheat | plastid | 46.75 | 46.8 |
| TraesCS6D01G153600.1 | Wheat | cytosol | 43.36 | 43.57 |
| TraesCS7D01G237500.1 | Wheat | plastid | 28.37 | 29.83 |
| TraesCS4D01G292300.2 | Wheat | plastid | 25.47 | 28.68 |
| TraesCS5D01G392700.1 | Wheat | plasma membrane | 21.18 | 24.85 |
| TraesCS7D01G412800.1 | Wheat | plasma membrane | 21.48 | 22.75 |
| TraesCS7D01G428700.1 | Wheat | plastid | 17.88 | 21.67 |
| TraesCS7D01G412400.1 | Wheat | plasma membrane | 21.18 | 21.14 |
Protein Annotations
| Gene3D:2.70.150.20 | MapMan:24.1.2.1.1 | Gene3D:3.30.70.100 | Gene3D:3.40.1110.10 | Gene3D:3.40.50.1000 | InterPro:ATPase_P-typ_P_site |
| InterPro:ATPase_P-typ_TM_dom_sf | InterPro:ATPase_P-typ_cyto_dom_N | InterPro:ATPase_P-typ_transduc_dom_A_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019829 | GO:GO:0030001 |
| GO:GO:0046872 | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:HMA_Cu_ion-bd | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:Heavy-metal-associated_CS | InterPro:IPR006121 | InterPro:IPR023214 | InterPro:IPR023299 | InterPro:P-typ_ATPase_IB | PFAM:PF00122 |
| PFAM:PF00403 | PFAM:PF00702 | PRINTS:PR00119 | PRINTS:PR00942 | ScanProsite:PS00154 | ScanProsite:PS01047 |
| PFscan:PS50846 | PANTHER:PTHR43520 | PANTHER:PTHR43520:SF14 | InterPro:P_typ_ATPase | SUPFAM:SSF55008 | SUPFAM:SSF56784 |
| SUPFAM:SSF81653 | SUPFAM:SSF81665 | TIGRFAMs:TIGR00003 | TIGRFAMs:TIGR01494 | TIGRFAMs:TIGR01525 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS7D01G467100 | EnsemblPlants:TraesCS7D01G467100.1 | TIGR:cd00371 | TIGR:cd02094 | SEG:seg | : |
Description
No Description!
Coordinates
chr7D:+:580570297..580576187
Molecular Weight (calculated)
106786.0 Da
IEP (calculated)
5.309
GRAVY (calculated)
0.323
Length
1001 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAHLQLAAVA GGGRAGDDME DVALLGSYDE EMGGAAPAGG GRGGAEEDAE AHVRVTGMTC SACTGAVEAA VSARRGVRRV AVSLLQNRAR VVFDPALVKV
0101: EDIIEAIEDA GFDAEILPDS AVPQPKSQKT LSAQFRIGGM TCANCVNSVE GILKKQPGIK GAVVALATSL GEVEYDPSTI SKDEIVQAIE DAGFEAAFLQ
0201: SSEQDKILLG LTGIHTERDA DILHDILKKM NGLREFAVNT TLSEVEIVFD PEAVGLRSIV DTIEMGSNGR FKAHVQNPYS RGASNDAHEA SKMLHLLCSS
0301: LFLSIPVFFI RMICPSIPFI STLLLRHCGP FHMGDLVNWI LVSIVQFVIG KRFYIAAYRA LRHGSTNMDV LVVLGTTASY VYSVCALLYG AFTGFQPPIY
0401: FETSAMIITF VLFGKYLEVL AKGKTSDAIK KLVELVPATA ILLLKDKEGK YVGEREIDAL LVQPGDVLKV LPGSKVPSDG VVVWGTSHIN ESMITGESAP
0501: MPKEVSSVVI GGTINLQGIL HIQATKVGSG TVLSQIISLV ETAQMSKAPI QKFADYVASI FVPIVITLSI LTFSVWFLCG SFGAYPHSWF DGTSNCFVFS
0601: LMFSISVVVI ACPCALGLAT PTAVMVATGI GANHGVLVKG GDALERAQNV NYVIFDKTGT LTQGKAVVTT AKVFSGMDLG DFLTLVASAE ASSEHPLAKA
0701: VLEYAFHFHF FGKLPSSKDG IEQRKEQILS QWLLEAEDFS AVPGKGVQCL INDKKVLIGN RALMNENGVT VPPEAESFLV DLELNAKTGI LVAYDSSFVG
0801: LMGIADPLKR EAAVVVEGLK KMGIHPVMLT GDNWRTAQAV AKEVGIEDVR AEVMPAGKAD VVRSLQKDGS IVAMVGDGIN DSPALAAADV GMAIGGGTDI
0901: AIEAADYVLV RNNLEDVITA IDLSRKTFNR IRWNYFFAMA YNVVAIPVAA GALFPLTGLQ MPPWLAGACM AFSSVSVVCS SLLLRRYRKP RLTTLLQITV
1001: E
0101: EDIIEAIEDA GFDAEILPDS AVPQPKSQKT LSAQFRIGGM TCANCVNSVE GILKKQPGIK GAVVALATSL GEVEYDPSTI SKDEIVQAIE DAGFEAAFLQ
0201: SSEQDKILLG LTGIHTERDA DILHDILKKM NGLREFAVNT TLSEVEIVFD PEAVGLRSIV DTIEMGSNGR FKAHVQNPYS RGASNDAHEA SKMLHLLCSS
0301: LFLSIPVFFI RMICPSIPFI STLLLRHCGP FHMGDLVNWI LVSIVQFVIG KRFYIAAYRA LRHGSTNMDV LVVLGTTASY VYSVCALLYG AFTGFQPPIY
0401: FETSAMIITF VLFGKYLEVL AKGKTSDAIK KLVELVPATA ILLLKDKEGK YVGEREIDAL LVQPGDVLKV LPGSKVPSDG VVVWGTSHIN ESMITGESAP
0501: MPKEVSSVVI GGTINLQGIL HIQATKVGSG TVLSQIISLV ETAQMSKAPI QKFADYVASI FVPIVITLSI LTFSVWFLCG SFGAYPHSWF DGTSNCFVFS
0601: LMFSISVVVI ACPCALGLAT PTAVMVATGI GANHGVLVKG GDALERAQNV NYVIFDKTGT LTQGKAVVTT AKVFSGMDLG DFLTLVASAE ASSEHPLAKA
0701: VLEYAFHFHF FGKLPSSKDG IEQRKEQILS QWLLEAEDFS AVPGKGVQCL INDKKVLIGN RALMNENGVT VPPEAESFLV DLELNAKTGI LVAYDSSFVG
0801: LMGIADPLKR EAAVVVEGLK KMGIHPVMLT GDNWRTAQAV AKEVGIEDVR AEVMPAGKAD VVRSLQKDGS IVAMVGDGIN DSPALAAADV GMAIGGGTDI
0901: AIEAADYVLV RNNLEDVITA IDLSRKTFNR IRWNYFFAMA YNVVAIPVAA GALFPLTGLQ MPPWLAGACM AFSSVSVVCS SLLLRRYRKP RLTTLLQITV
1001: E
0001: MAPSRRDLQL TPVTGGSSSQ ISDMEEVGLL DSYHNEANAD DILTKIEEGR DVSGLRKIQV GVTGMTCAAC SNSVEAALMN VNGVFKASVA LLQNRADVVF
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E
Arabidopsis Description
RAN1Copper-transporting ATPase RAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.