Factsheet for Zm00001d046953_P002

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d031132_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G44790.1	Zm00001d031132_P002	AT1G66240.1	17223078

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011553_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	16.63	93.99
KXG20553	Sorghum	plasma membrane	88.97	91.36
Zm00001d027860_P001	Maize	plasma membrane	14.51	89.29
TraesCS7B01G382300.1	Wheat	cytosol	80.75	83.42
Os06t0665800-01	Rice	cytosol	80.85	83.35
TraesCS7D01G467100.1	Wheat	cytosol	80.56	83.22
TraesCS7A01G480100.1	Wheat	cytosol	80.37	83.02
Zm00001d053783_P001	Maize	plasma membrane	76.21	78.96
HORVU7Hr1G108890.1	Barley	cytosol, mitochondrion	77.08	77.91
GSMUA_Achr8P06970_001	Banana	cytosol	67.02	73.41
GSMUA_Achr5P26800_001	Banana	cytosol	65.57	72.44
CDY67984	Canola	cytosol, peroxisome, plasma membrane	17.12	72.24
VIT_01s0011g01360.t01	Wine grape	cytosol	62.77	64.9
KRH37212	Soybean	cytosol	61.22	64.2
KRH12191	Soybean	cytosol	61.22	63.55
Solyc02g068490.2.1	Tomato	cytosol	61.41	63.31
PGSC0003DMT400024409	Potato	cytosol	61.12	63.07
AT5G44790.1	Thale cress	cytosol	61.03	63.04
CDY50771	Canola	cytosol	60.35	62.78
KRH58516	Soybean	cytosol	60.15	62.58
CDY39400	Canola	cytosol	60.35	62.46
Bra025102.1-P	Field mustard	cytosol	59.77	61.99
KRH42397	Soybean	cytosol	59.57	61.97
Bra027573.1-P	Field mustard	cytosol	59.28	61.18
CDY69037	Canola	cytosol	30.56	54.11
CDY67659	Canola	cytosol	30.66	53.28
CDY26408	Canola	golgi, nucleus, plasma membrane	8.12	48.55
Zm00001d002708_P001	Maize	mitochondrion	43.13	44.64
Zm00001d015829_P003	Maize	plasma membrane	40.91	43.16
Zm00001d002705_P002	Maize	cytosol, plastid	43.13	43.05
Zm00001d027884_P003	Maize	plastid	24.08	27.61
Zm00001d052801_P004	Maize	plastid	25.53	27.27
Zm00001d005190_P001	Maize	plastid	20.31	23.39
Zm00001d005189_P001	Maize	plasma membrane	19.83	21.27
Zm00001d014569_P002	Maize	plastid	15.96	20.05
Zm00001d014669_P007	Maize	plasma membrane	19.34	18.2
Zm00001d019226_P003	Maize	cytosol	14.7	17.02

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A1D6P5L7
ProteinID:AQL05239.1	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	InterPro:IPR023214
InterPro:IPR023299	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119
ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846	PANTHER:PTHR43520	PANTHER:PTHR43520:SF14	InterPro:P_typ_ATPase
SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR00003	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0008456F7A	EnsemblPlantsGene:Zm00001d046953	EnsemblPlants:Zm00001d046953_P002	EnsemblPlants:Zm00001d046953_T002
SEG:seg	:	:	:	:	:

Description

Copper-transporting ATPase RAN1

Coordinates

chr9:-:112757121..112765326

Molecular Weight (calculated)

110320.0 Da

IEP (calculated)

5.256

GRAVY (calculated)

0.316

Length

1034 amino acids

Sequence
(BLAST)

0001: MAHLQLSAVA GARPAAAGGR GDEMEDVALL DSYDEEMGLP LPGASGAEAA EAHVRVTGMT CSACTSAVEA AVSARRGVRR VAVSLLQNRA HVMFDPALAK
0101: VLTGAPLLAL VWRISTGDAI LAYSQPLSGR EARAVPWEVG SSPVEDIIEA IEDAGFEAEI IPESAVSQPK SQKTLSAQFR IGGMTCANCV NSVEGILKKL
0201: PGVKGAVVAL ATSLGEVEYI PSAISKDEIV QAIEDAGFEA AFLQSTEQDK VLLGLIGLHT ERDVELLSDI LKKIDGLRQF GVNSVLSEVE IVFDPEAVGL
0301: RSIVDTIEMT SNGSLKAHVQ NPYTRGASND AQEASKMLNL LRSSLFLSIP VFFIRMVCPS IPFLSTLLSM HCGPFLMGDL LKWILVSIVQ FVVGKRFYVA
0401: AYRAVRHGST NMDVLVVLGT TASYAYSVCA LLYGAFTGYH PPIYFETSAM IITFVLLGKY LEVLAKGKTS DAIKKLVELV PSTAVLVLKD KEGKHVGERE
0501: IDARLVQPGD VLKVLPGSKI PADGVVVWGT SHVNESMITG ESAPIPKEVS SVPTTAIWYK SFRHGFVFIY PSETYRQEVA SIFVPIVITL SIVTFSAWFL
0601: CGWLGAYPNS WVAENSNCFV FSLMFAISVV VIACPCALGL ATPTAVMVAT GIGANHGVLV KGGDALERAQ NVNYVVFDKT GTLTQGKAVV TAAKVFSGMD
0701: LGDFLTLVAS AEASSEHPLA KAILDYALHF HFFGKLPSSK DGIEQRKDKV LSQWLLEAED FSAVPGKGVQ CSINGKHVLV GNRSLMTENG VTIPPEAETF
0801: LIDLESNAKT GILVAYDGDF VGLMGITDPL KREAAVVVEG LKKLGVHPVM LTGDNWRTAQ AVAKEVGIED VRAEVMPAGK ADVVRSLQKD GGTVAMVGDG
0901: INDSPALAAA DVGMAIGGGT DIAIEAADYV LVRNNLEDVI TAIDLSRKTF SRIRWNYFFA MAYNVVAIPI AAGALFPFTG LQMPPWLAGA CMAFSSVSVV
1001: CSSLLLRRNE LEIASEMAPS VNCTPLSHIK IRYT

Best Arabidopsis Sequence Match ( AT5G44790.1 )
(BLAST)

0001: MAPSRRDLQL TPVTGGSSSQ ISDMEEVGLL DSYHNEANAD DILTKIEEGR DVSGLRKIQV GVTGMTCAAC SNSVEAALMN VNGVFKASVA LLQNRADVVF
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E

Arabidopsis Description

RAN1Copper-transporting ATPase RAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.