Factsheet for Zm00001d002705_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d031132_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G63440.1	Zm00001d031132_P002	AT1G66240.1	16367966

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26864	Sorghum	cytosol, plasma membrane, plastid	90.93	87.06
HORVU2Hr1G097010.1	Barley	plasma membrane	56.47	87.05
Zm00001d002708_P001	Maize	mitochondrion	82.92	85.99
Os04t0556000-01	Rice	plastid	81.27	84.03
TraesCS2B01G429200.2	Wheat	mitochondrion	80.02	83.4
TraesCS2D01G407800.5	Wheat	plastid	79.63	82.5
TraesCS2A01G410400.3	Wheat	mitochondrion	79.25	81.21
GSMUA_Achr5P12290_001	Banana	plasma membrane	42.66	78.93
PGSC0003DMT400032161	Potato	cytosol, plasma membrane, vacuole	10.04	78.79
VIT_02s0025g03640.t01	Wine grape	golgi, peroxisome, plasma membrane	35.91	75.0
Solyc08g080870.2.1	Tomato	cytosol	64.67	70.23
CDX91834	Canola	cytosol, peroxisome, plasma membrane	56.76	68.53
KRH27938	Soybean	plasma membrane	18.63	67.96
GSMUA_Achr5P12300_001	Banana	cytosol	51.74	67.25
AT1G63440.1	Thale cress	mitochondrion	64.09	66.73
CDY50396	Canola	cytosol	60.71	64.65
KRH77529	Soybean	cytosol	60.52	64.18
CDY49160	Canola	cytosol	59.94	63.82
Bra003110.1-P	Field mustard	cytosol	59.94	63.56
GSMUA_Achr1P00300_001	Banana	cytosol	53.09	62.57
CDY34353	Canola	mitochondrion	62.26	62.5
CDY25498	Canola	mitochondrion	62.36	62.48
CDX93870	Canola	endoplasmic reticulum, plasma membrane	42.86	60.82
Zm00001d015829_P003	Maize	plasma membrane	52.9	55.92
Bra027641.1-P	Field mustard	mitochondrion	63.61	55.29
Zm00001d027860_P001	Maize	plasma membrane	8.11	50.0
Zm00001d011553_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	8.59	48.63
Zm00001d053783_P001	Maize	plasma membrane	45.37	47.09
Zm00001d046953_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	43.05	43.13
VIT_02s0025g03630.t01	Wine grape	cytosol	66.41	35.54
Zm00001d027884_P003	Maize	plastid	25.68	29.49
Zm00001d052801_P004	Maize	plastid	26.25	28.1
Zm00001d005190_P001	Maize	plastid	20.56	23.72
Zm00001d014569_P002	Maize	plastid	17.76	22.36
Zm00001d005189_P001	Maize	plasma membrane	19.79	21.27
Zm00001d014669_P007	Maize	plasma membrane	19.5	18.38
Zm00001d019226_P003	Maize	cytosol	15.83	18.37

Protein Annotations

EntrezGene:100274413	Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
UniProt:A0A1D6E3L5	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005507
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121
InterPro:IPR023214	InterPro:IPR023299	ProteinID:ONM15136.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403
PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00942	PRINTS:PR00943	ScanProsite:PS00154	ScanProsite:PS01047
PFscan:PS50846	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR00003	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix
UniParc:UPI0004DE7BA9	EnsemblPlantsGene:Zm00001d002705	EnsemblPlants:Zm00001d002705_P002	EnsemblPlants:Zm00001d002705_T002	SEG:seg	:

Description

Putative ATP dependent copper transporter

Coordinates

chr2:-:19814237..19820680

Molecular Weight (calculated)

112106.0 Da

IEP (calculated)

7.243

GRAVY (calculated)

0.149

Length

1036 amino acids

Sequence
(BLAST)

0001: MPARFKPNHP DENPQPPPAR LLRGRGVVGW LHRTAMVATT RRALFLSCFH GGSEMSPRLS LRPRYPSMPR RPKGVAAAGG GGNGDLEAAV GTGDDEEEKV
0101: AVFSVSGMTC AACAGSVEKA VKRLPGIHDA AVDVLWGRAQ VVFYPAFVSE NKITEAIEDV GFEAKLIDEE VKEKNILLCR LHIKGMACKY CTSTVEFALQ
0201: ASPGVQRASV ALATEEAEIR YDRRIISASQ LIQAVEETGF EALLVTAGED QSRIDLKMDG VLDERLIMIL KSSIQALPGV ENVKFNSELH KVTVSYNPDH
0301: TGPRDLIEVI KAATFGHVNA SIYLEADGRD QHRYGEIKQY RQSFLWSLIF TIPVFLTSMV FMYIPWLKDG LEKKVVNMMS IGELLRWILS TPVQFVIGRK
0401: FYTGAYKAMC RGSPNMDVLI ALGTNTAYLY SVYSVLRAAT SGNYMSTDFF ETSSMLISFI LLGKYLEILA KGKTSEAIAK LMDLAPETAT LLVYDYEGNV
0501: VGEKEIDSRL IQKNDVIKVV PGGKVASDGF VIWGQSHVNE SMITGESQPV AKRKGDTVIG GTVNENGVLH VRATFVGSES ALAQIVRLVE SAQMAKAPVQ
0601: KFADHISRVF VPLVILLSMV TWLAWFVAGR LHSYPQSWIP RFMDSFQLAL QFGISVMVIA CPCALGLATP TAVMVATGVG ASHGVLIKGG QALESAQKVD
0701: CIVFDKTGTL TIGKPVVVDT RLLKNMVLRE FYDYAAAAEV NSEHPLAKAI VEHAKKLRPE GNHMWPEARE FISVTGQGVK AEVSGKSVIV GNKGLMLSSG
0801: IGIPLEASEI LVEEEGKART GIIVAVDREV AGVISVSDPT KPNALQVISY LKSMNVESIM VTGDNWGTAN AIGREVGIEK IIAEAKPEQK AERVKELQLS
0901: GRTVAMVGDG INDSPALVSA DVGLAIGAGT DVAIEAADIV LMKSNLEDVV TAIDLSRKAF FRIRMNYVWA LGYNVVGIPI AAGVLFPSTG FRLPPWVAGA
1001: AMAASSVSVV CWSLLLRYYK APKIAGTAKE IGITTL

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.