Factsheet for PGSC0003DMT400032161

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

cytosol 2
plasma membrane 4
endoplasmic reticulum 2
golgi 2
extracellular 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, golgi, plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59857	Soybean	cytosol	90.91	48.98
PGSC0003DMT400032160	Potato	endoplasmic reticulum, plasma membrane, vacuole	85.61	28.46
VIT_02s0025g03640.t01	Wine grape	golgi, peroxisome, plasma membrane	89.39	23.79
GSMUA_Achr5P12290_001	Banana	plasma membrane	81.06	19.11
KRH41158	Soybean	plasma membrane	90.15	17.55
HORVU2Hr1G097010.1	Barley	plasma membrane	77.27	15.18
KRH77528	Soybean	mitochondrion	92.42	14.1
GSMUA_Achr5P12300_001	Banana	cytosol	84.85	14.05
CDX91834	Canola	cytosol, peroxisome, plasma membrane	90.91	13.99
Solyc08g080870.2.1	Tomato	cytosol	98.48	13.63
GSMUA_Achr1P00300_001	Banana	cytosol	82.58	12.4
KRG95266	Soybean	cytosol	90.15	12.09
AT1G63440.1	Thale cress	mitochondrion	90.15	11.96
Bra003110.1-P	Field mustard	cytosol	87.88	11.87
CDY50396	Canola	cytosol	87.12	11.82
CDY49160	Canola	cytosol	86.36	11.72
CDY34353	Canola	mitochondrion	86.36	11.05
CDY25498	Canola	mitochondrion	86.36	11.03
KRH77529	Soybean	cytosol	81.06	10.95
Zm00001d002708_P001	Maize	mitochondrion	78.79	10.41
EES11247	Sorghum	mitochondrion	78.79	10.38
TraesCS2B01G429200.2	Wheat	mitochondrion	77.27	10.26
TraesCS2D01G407800.5	Wheat	plastid	77.27	10.2
Os04t0556000-01	Rice	plastid	77.27	10.18
TraesCS2A01G410400.3	Wheat	mitochondrion	77.27	10.09
Zm00001d002705_P002	Maize	cytosol, plastid	78.79	10.04
Bra027641.1-P	Field mustard	mitochondrion	86.36	9.56
KXG26864	Sorghum	cytosol, plasma membrane, plastid	78.03	9.52
PGSC0003DMT400024409	Potato	cytosol	71.97	9.48
VIT_02s0025g03630.t01	Wine grape	cytosol	89.39	6.1
PGSC0003DMT400064232	Potato	plastid	29.55	4.77
CDX93870	Canola	endoplasmic reticulum, plasma membrane	12.12	2.19
KRH27938	Soybean	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400032161	EnsemblPlantsGene:PGSC0003DMG400012348	Gene3D:3.40.50.1000	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:P_typ_ATPase	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417
PGSC:PGSC0003DMG400012348	PRINTS:PR00119	PRINTS:PR00120	SEG:seg	SUPFAM:SSF56784	TIGRFAMs:TIGR01494
TMHMM:TMhelix	UniParc:UPI000296A777	UniProt:M1AX00	MapMan:24.1.2.1.1	:	:

Description

Heavy metal ATPase [Source:PGSC_GENE;Acc:PGSC0003DMG400012348]

Coordinates

chr8:+:54643205..54644068

Molecular Weight (calculated)

13920.0 Da

IEP (calculated)

5.034

GRAVY (calculated)

0.515

Length

132 amino acids

Sequence
(BLAST)

001: MVGDGINDSP ALVAADVGMA IGAGTDIAIE AADIVLMKSN LEDVITAIDL SRKTFSRIRL NYFWAFGYNL LGIPIAAGAL FPFTGFRLPP WVAGAAMAAS
101: SVSVVCSSLL LKNYKRPKKL DNLEIGGITV ES

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.