Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 8
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400032161 | Potato | cytosol, plasma membrane, vacuole | 28.46 | 85.61 |
| Solyc08g080890.2.1 | Tomato | cytosol | 96.22 | 42.92 |
| PGSC0003DMT400024409 | Potato | cytosol | 56.68 | 22.46 |
| PGSC0003DMT400064232 | Potato | plastid | 26.45 | 12.85 |
Protein Annotations
| MapMan:24.1.2.1.1 | Gene3D:3.40.1110.10 | Gene3D:3.40.50.1000 | InterPro:ATPase_P-typ_P_site | InterPro:ATPase_P-typ_cyto_dom_N | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006812 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019829 |
| GO:GO:0099132 | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 | InterPro:IPR023299 | UniProt:M1AWZ9 |
| InterPro:P-typ_ATPase_IB | PFAM:PF00122 | PFAM:PF00702 | EnsemblPlantsGene:PGSC0003DMG400012347 | PGSC:PGSC0003DMG400012347 | EnsemblPlants:PGSC0003DMT400032160 |
| PRINTS:PR00119 | PRINTS:PR00120 | ScanProsite:PS00154 | PANTHER:PTHR24093 | PANTHER:PTHR24093:SF417 | InterPro:P_typ_ATPase |
| SUPFAM:SSF56784 | TIGRFAMs:TIGR01494 | TIGRFAMs:TIGR01525 | TMHMM:TMhelix | UniParc:UPI000295A3A2 | SEG:seg |
Description
Copper-transporting atpase p-type [Source:PGSC_GENE;Acc:PGSC0003DMG400012347]
Coordinates
chr8:+:54647375..54653935
Molecular Weight (calculated)
41919.4 Da
IEP (calculated)
4.846
GRAVY (calculated)
0.331
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSFELALQF GISVMVVACP CALGLATPTA VMVGTGVGAS LGVLIKGGQA LESAQEVNCI VFDKTGTLTI GKPMVVNTRL FKIMVPQEFY ELIAAAEVNS
101: DHPLAKAIVE YAKKLRGGEE NLAWPEASDF ESITGHGVKA IICNKEVILG NKSLMMEQGI AIPVEAEEAL AEAEGQAQTG ILVSIDKELI GVLSVSDPLK
201: PEAPEVISIL KSMNVESMIV TGDNWGTANA IAKQVGIERK NVVAEAKPEQ KAEKVKELQD LGKVVAMVGD GVNDSPALVA ADVGIAIGAG TDIAIEAADI
301: VLMKSSLKDV ITAIDLSKKT FRRIHLNYFW ALGYNLLGIP IAAGVLFPST HFRLPPWIAG AAMAASSVSV VCSSLLLKNY KKPKKLNTLD LQGITVE
101: DHPLAKAIVE YAKKLRGGEE NLAWPEASDF ESITGHGVKA IICNKEVILG NKSLMMEQGI AIPVEAEEAL AEAEGQAQTG ILVSIDKELI GVLSVSDPLK
201: PEAPEVISIL KSMNVESMIV TGDNWGTANA IAKQVGIERK NVVAEAKPEQ KAEKVKELQD LGKVVAMVGD GVNDSPALVA ADVGIAIGAG TDIAIEAADI
301: VLMKSSLKDV ITAIDLSKKT FRRIHLNYFW ALGYNLLGIP IAAGVLFPST HFRLPPWIAG AAMAASSVSV VCSSLLLKNY KKPKKLNTLD LQGITVE
001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV
Arabidopsis Description
HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.