Factsheet for Solyc08g080890.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032160	Potato	endoplasmic reticulum, plasma membrane, vacuole	42.92	96.22
Solyc08g080870.2.1	Tomato	cytosol	72.58	67.71
Solyc11g062120.1.1	Tomato	cytosol, peroxisome, plasma membrane	18.65	55.89
Solyc11g062100.1.1	Tomato	cytosol, peroxisome, plasma membrane	35.39	46.67
Solyc02g068490.2.1	Tomato	cytosol	48.88	43.37
Solyc01g105160.2.1	Tomato	plastid	27.42	33.61
Solyc08g061610.2.1	Tomato	plastid	29.33	29.19
Solyc02g092920.2.1	Tomato	plastid	19.89	21.56
Solyc07g009130.2.1	Tomato	plastid	20.9	14.29

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0043231	GO:GO:0046872
GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	UniProt:K4CP87	InterPro:P-typ_ATPase_IB
PFAM:PF00122	PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00942	PRINTS:PR00943
ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417	InterPro:P_typ_ATPase
SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	EnsemblPlantsGene:Solyc08g080890.2	EnsemblPlants:Solyc08g080890.2.1
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI000276BCD6	SEG:seg	:

Description

No Description!

Coordinates

chr8:+:64062295..64065752

Molecular Weight (calculated)

96586.6 Da

IEP (calculated)

5.981

GRAVY (calculated)

0.200

Length

890 amino acids

Sequence
(BLAST)

001: MIRDTMEDVG FQANKLIEEE MHHEKSSQVC RIQVNGMTCT SCSTTLESAL QVIPGVQKAR VALATQEAEI CYDPKIVECN QLLEAIGNTG FEGILISTGG
101: DSSRILLKVD GVDTENCVKL IKNSLLALQG VQEIDFDIQL KKLSVSYTAD VTGPRDFIRA IESTESGCFK ACIFPQGRER EEHRQHEIRQ YYKAFIWSLV
201: FTVPVFFTSM VFMYIPGLKD VLETKVANML TVGQVVRWVL STPVQFIIGR KFYVGAYISL THGYANMDVL IALGTNAAYF YSVYSVLRAA TSPTFKASDF
301: FETSSMLISF ILLGKYLEVL ARGKTSEAIA KLMDLAPKTA TLLTLDDKGN VVNEEEVDSR LIQKNDVIKT IPGSKVACDG LVIRGQSHIN ESMITGESRP
401: VTRKTGDMVI GGTLNENGVL HIKATRVGSE TALSQIVRLV ESAQMAKAPV QRFADHISKY FVPIVIALSF CTWISWFLAG TFNSYPRTWI PSSMDSFELA
501: LQFGISVMVV ACPCALGLAT PTAVMVGTGV GASLGVLIKG GQALESAQEV NCIVFDKTGT LTIGKPMVVN TRIFKTMVSE EFYQLIAAAE VNSDHPLAKA
601: IVEYAKKLRG SEENLAWSEA SDFKSIAGHG VKAIICNKEV ILGNKSLMME QGIVVPVEAE EALAETEGQA QTGILVSIDK ELIGVLSVSD PLKPEAPEVI
701: SILKSMNIES MIVTGDNWGT ANAIAKQVGI ERKHVVAEAK PEQKAEKVKE LQDLGKVVAM VGDGVNDSPA LVAADVGIAI GAGTDIAIEA ADIVLMKSSL
801: KDVITAIDLS KKTFRRIHLN YFWALGYNLL SIPIAAGVLF PSTHFRLPPW IAGAAMAASS VSVVCSSLLL KNYKKPKKLN TLDLQGITVE

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.