Factsheet for Solyc08g061610.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P30620_001	Banana	cytosol	65.66	73.01
VIT_04s0008g01960.t01	Wine grape	plastid	71.36	71.85
KRH52252	Soybean	plastid	71.48	70.76
AT5G21930.1	Thale cress	plastid	68.34	69.2
CDY16605	Canola	plastid	67.9	68.59
Bra002374.1-P	Field mustard	plastid	67.79	68.47
CDX92394	Canola	plastid	67.79	68.47
TraesCS4B01G293600.3	Wheat	mitochondrion, plasma membrane	55.59	67.71
KRH61581	Soybean	plastid	37.58	66.53
HORVU0Hr1G009080.5	Barley	mitochondrion, plasma membrane	55.48	65.18
HORVU4Hr1G076330.4	Barley	golgi, mitochondrion	44.85	64.57
KXG40056	Sorghum	plastid	63.87	63.44
Os03t0178100-00	Rice	plastid	62.64	62.08
TraesCS4D01G292300.2	Wheat	plastid	61.63	61.98
Zm00001d027884_P003	Maize	plastid	62.3	61.75
TraesCS4A01G010800.1	Wheat	mitochondrion	61.3	61.57
Solyc01g105160.2.1	Tomato	plastid	35.35	43.53
Solyc11g062120.1.1	Tomato	cytosol, peroxisome, plasma membrane	11.3	34.01
Solyc08g080890.2.1	Tomato	cytosol	29.19	29.33
Solyc02g068490.2.1	Tomato	cytosol	31.32	27.92
Solyc08g080870.2.1	Tomato	cytosol	29.42	27.57
Solyc11g062100.1.1	Tomato	cytosol, peroxisome, plasma membrane	18.01	23.85
Solyc02g092920.2.1	Tomato	plastid	20.47	22.29
Solyc07g009130.2.1	Tomato	plastid	21.81	14.98

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005375	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006812	GO:GO:0006825	GO:GO:0008150	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829
GO:GO:0030001	GO:GO:0035434	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	UniProt:K4CKV0
InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154
PFscan:PS50846	PANTHER:PTHR43520	PANTHER:PTHR43520:SF10	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	EnsemblPlantsGene:Solyc08g061610.2	EnsemblPlants:Solyc08g061610.2.1	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI000276ACAB	SEG:seg	:	:

Description

Copper-transporting ATPase PAA2, chloroplastic [Source:Projected from Arabidopsis thaliana (AT5G21930) UniProtKB/Swiss-Prot;Acc:B9DFX7]

Coordinates

chr8:-:49180128..49201683

Molecular Weight (calculated)

95209.6 Da

IEP (calculated)

6.306

GRAVY (calculated)

0.118

Length

894 amino acids

Sequence
(BLAST)

001: MTANLLRFSL SHDHNLTSNF IRSNANHERR SFYFNPFIHQ RRRTSQLLLR RNAVFAKAVE FNVTPSGNEQ QVQLKNDETT ALLDVSGMMC GACVSRVKAI
101: LSADDRVDSA VVNMLTETAA VKLKADAAET GLAAQELAKR LTECGFPTKK RSSGLGIDAK VNKWKETVKK KEALLIESRN RVAFAWTLVA LCCGTHAAHI
201: LHSLGIHIHG SMLDILHNSY VKAGLAVGAL LGPGRDLLFD GLRAFTKGSP NMNSLVGFGS IAAFAISSVS LLNSELQWEA SFFDEPVMLL GFVLLGRSLE
301: ERARLKASSD MNELLSLIST QSRLVITSSG SDSSTDVVGS DAICIEVPTD DIRVGDSLLV FPGETIPVDG RVVAGRSVVD ESMLTGESLP VFKEKGVSVS
401: AGTINWDSPL RIEASSTGSN STISKIVNMV EDAQGREAPI QRLADTIAGP FVYSVMTLSA ATFGFWYYVG SNIFPDVLLN DIAGPEGDPL LLSLKLAVDV
501: LVVSCPCALG LATPTAILVG TSLGARQGLL IRGGDVLERL ASVDHVMLDK TGTLTEGKPA VSAITSLGHE ELEILQIAAA VEKTTSHPIA HAIISKAESL
601: NLSVPVTRGQ LAEPGSGTMG EVNGLLVAIG KLKWVQERFQ QKTERSDLMA LEQSVMLKSL QDSQSSNHST TVVYVGREGE GVIGAIAISD KLREDAESTI
701: SRLQHKGIET VLLSGDREEA VATVAKTVGI KDKFVNASLT PQQKSAAISG LQASGHRVAM VGDGINDAPS LALADVGIAL QVEAQETAAS NAASIILLGN
801: RLSQVLEALD LAQATMAKVH QNLSWAVAYN VIAIPIAAGV LLPNFDFAMT PSLSGGLMAM SSIFVVSNSL LLQFHGSQKN RKENLTYKPA QKEQ

Best Arabidopsis Sequence Match ( AT5G21930.1 )
(BLAST)

001: MASNLLRFPL PPPSSLHIRP SKFLVNRCFP RLRRSRIRRH CSRPFFLVSN SVEISTQSFE STESSIESVK SITSDTPILL DVSGMMCGGC VARVKSVLMS
101: DDRVASAVVN MLTETAAVKF KPEVEVTADT AESLAKRLTE SGFEAKRRVS GMGVAENVKK WKEMVSKKED LLVKSRNRVA FAWTLVALCC GSHTSHILHS
201: LGIHIAHGGI WDLLHNSYVK GGLAVGALLG PGRELLFDGI KAFGKRSPNM NSLVGLGSMA AFSISLISLV NPELEWDASF FDEPVMLLGF VLLGRSLEER
301: AKLQASTDMN ELLSLISTQS RLVITSSDNN TPVDSVLSSD SICINVSVDD IRVGDSLLVL PGETFPVDGS VLAGRSVVDE SMLTGESLPV FKEEGCSVSA
401: GTINWDGPLR IKASSTGSNS TISKIVRMVE DAQGNAAPVQ RLADAIAGPF VYTIMSLSAM TFAFWYYVGS HIFPDVLLND IAGPDGDALA LSLKLAVDVL
501: VVSCPCALGL ATPTAILIGT SLGAKRGYLI RGGDVLERLA SIDCVALDKT GTLTEGRPVV SGVASLGYEE QEVLKMAAAV EKTATHPIAK AIVNEAESLN
601: LKTPETRGQL TEPGFGTLAE IDGRFVAVGS LEWVSDRFLK KNDSSDMVKL ESLLDHKLSN TSSTSRYSKT VVYVGREGEG IIGAIAISDC LRQDAEFTVA
701: RLQEKGIKTV LLSGDREGAV ATVAKNVGIK SESTNYSLSP EKKFEFISNL QSSGHRVAMV GDGINDAPSL AQADVGIALK IEAQENAASN AASVILVRNK
801: LSHVVDALSL AQATMSKVYQ NLAWAIAYNV ISIPIAAGVL LPQYDFAMTP SLSGGLMALS SIFVVSNSLL LQLHKSETSK NSL

Arabidopsis Description

PAA2Copper-transporting ATPase PAA2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFX7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.