Factsheet for GSMUA_Achr8P30620_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G293600.3	Wheat	mitochondrion, plasma membrane	66.04	72.34
HORVU0Hr1G009080.5	Barley	mitochondrion, plasma membrane	66.54	70.3
HORVU4Hr1G076330.4	Barley	golgi, mitochondrion	53.48	69.24
KRH52252	Soybean	plastid	74.0	65.89
TraesCS4D01G292300.2	Wheat	plastid	72.76	65.8
Solyc08g061610.2.1	Tomato	plastid	73.01	65.66
KXG40056	Sorghum	plastid	73.38	65.56
TraesCS4A01G010800.1	Wheat	mitochondrion	72.51	65.51
VIT_04s0008g01960.t01	Wine grape	plastid	72.14	65.32
Zm00001d027884_P003	Maize	plastid	73.01	65.08
Os03t0178100-00	Rice	plastid	73.01	65.08
CDY16605	Canola	plastid	70.65	64.18
CDX92394	Canola	plastid	70.52	64.07
AT5G21930.1	Thale cress	plastid	70.27	63.99
Bra002374.1-P	Field mustard	plastid	70.4	63.95
KRH61581	Soybean	plastid	38.56	61.39
GSMUA_Achr7P12640_001	Banana	cytosol	42.16	40.6
GSMUA_Achr5P12290_001	Banana	plasma membrane	25.25	36.25
GSMUA_Achr8P06970_001	Banana	cytosol	32.09	27.33
GSMUA_Achr3P11880_001	Banana	cytosol	29.73	26.41
GSMUA_Achr5P12300_001	Banana	cytosol	25.5	25.72
GSMUA_Achr5P26800_001	Banana	cytosol	29.85	25.64
GSMUA_Achr4P30180_001	Banana	plasma membrane	24.0	25.26
GSMUA_Achr5P22660_001	Banana	plasma membrane	24.0	23.62
GSMUA_Achr1P00300_001	Banana	cytosol	25.75	23.55
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	24.63	21.18
GSMUA_Achr8P24660_001	Banana	cytosol	23.88	20.4
GSMUA_Achr9P16140_001	Banana	plastid	20.9	19.51

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005375	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006812	GO:GO:0006825	GO:GO:0008150	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829
GO:GO:0030001	GO:GO:0035434	GO:GO:0046872	GO:GO:0099132	EnsemblPlantsGene:GSMUA_Achr8G30620_001	EnsemblPlants:GSMUA_Achr8P30620_001
EnsemblPlants:GSMUA_Achr8T30620_001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
InterPro:IPR023214	InterPro:IPR023299	UniProt:M0TV14	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403
PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154	PFscan:PS50846	PANTHER:PTHR43520	PANTHER:PTHR43520:SF10
InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI000296657D	SEG:seg	:

Description

Putative copper-transporting ATPase PAA1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G30620_001]

Coordinates

chr8:-:32596715..32605504

Molecular Weight (calculated)

84659.1 Da

IEP (calculated)

5.101

GRAVY (calculated)

0.243

Length

804 amino acids

Sequence
(BLAST)

001: MMCGACAARV RSILSADDRV DSAAVNMLTE TAAVRLGTSG DEPERVAEEL AERLAQCGFP SKRRRTGLGV QENVRKWREM AERKEKLLAA SRNRVVFAWT
101: LVALCCGSHG THLLHSLGIH VAHGSFLDIL HNSYVKCGIA LGSLLGPGRE LLLDGLRAFA NASPNMNSLV GFGSIAAFLI SAMSLLNPGL QWEASFFDEP
201: VMLLGFVLLG RSLEERARLQ ASSDMNELLS LVSSQSRLII SSPEENPTSD SFLSADAISI EVPTDDVRIG DTILVLPGET IPVDGKVLGG RSVVDESMLT
301: GESLPVFKEH GHSVSAGTVN WDGPLRIEAV KTGAMSTISK IVRMVEEAQA HQAPIQRLAD SIAGPFVYSV MTLSAATFAF WYYIGTHIFP DVLLNDIAGP
401: DADPLLLSLK LSVDVLVVSC PCALGLATPT AILVGTSMGA KQGLLIRGGN VLERLAGIDV IALDKTGTLT EGKPVVTAIA SLDYEESEIL RLAAAVEKTA
501: SHPIAKAILD KAESLNFGVP STSGQLTEPG FGSLAEVDGS LVAVGRLDWV HERFQKKAST SELLDLENRV GCLSSSMATS SKQSKSVVYV GKEDEGIIGA
601: IAISDVLRYD AKSTVSKLQG MGIKSVLVSG DREEAVTSVG EMVGIGTINA ALTPQQKSSI ISSLQAEGHS VAMVGDGIND APSLALADVG VALQIEAKEN
701: AASDAASVIL LGNRLSQIVD AISLAQATMA KVHQNLAWAV AYNAVAIPIA AGVLLPNFDF AMTPSLSGGL MALSSIFVVS NSLLLQLHGS FPKKANNYKA
801: NVDK

Best Arabidopsis Sequence Match ( AT5G21930.1 )
(BLAST)

001: MASNLLRFPL PPPSSLHIRP SKFLVNRCFP RLRRSRIRRH CSRPFFLVSN SVEISTQSFE STESSIESVK SITSDTPILL DVSGMMCGGC VARVKSVLMS
101: DDRVASAVVN MLTETAAVKF KPEVEVTADT AESLAKRLTE SGFEAKRRVS GMGVAENVKK WKEMVSKKED LLVKSRNRVA FAWTLVALCC GSHTSHILHS
201: LGIHIAHGGI WDLLHNSYVK GGLAVGALLG PGRELLFDGI KAFGKRSPNM NSLVGLGSMA AFSISLISLV NPELEWDASF FDEPVMLLGF VLLGRSLEER
301: AKLQASTDMN ELLSLISTQS RLVITSSDNN TPVDSVLSSD SICINVSVDD IRVGDSLLVL PGETFPVDGS VLAGRSVVDE SMLTGESLPV FKEEGCSVSA
401: GTINWDGPLR IKASSTGSNS TISKIVRMVE DAQGNAAPVQ RLADAIAGPF VYTIMSLSAM TFAFWYYVGS HIFPDVLLND IAGPDGDALA LSLKLAVDVL
501: VVSCPCALGL ATPTAILIGT SLGAKRGYLI RGGDVLERLA SIDCVALDKT GTLTEGRPVV SGVASLGYEE QEVLKMAAAV EKTATHPIAK AIVNEAESLN
601: LKTPETRGQL TEPGFGTLAE IDGRFVAVGS LEWVSDRFLK KNDSSDMVKL ESLLDHKLSN TSSTSRYSKT VVYVGREGEG IIGAIAISDC LRQDAEFTVA
701: RLQEKGIKTV LLSGDREGAV ATVAKNVGIK SESTNYSLSP EKKFEFISNL QSSGHRVAMV GDGINDAPSL AQADVGIALK IEAQENAASN AASVILVRNK
801: LSHVVDALSL AQATMSKVYQ NLAWAIAYNV ISIPIAAGVL LPQYDFAMTP SLSGGLMALS SIFVVSNSLL LQLHKSETSK NSL

Arabidopsis Description

PAA2Copper-transporting ATPase PAA2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFX7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.