Factsheet for Solyc08g080870.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032161	Potato	cytosol, plasma membrane, vacuole	13.63	98.48
VIT_02s0025g03640.t01	Wine grape	golgi, peroxisome, plasma membrane	43.08	82.86
KRH41158	Soybean	plasma membrane	57.76	81.27
GSMUA_Achr5P12290_001	Banana	plasma membrane	47.38	80.71
HORVU2Hr1G097010.1	Barley	plasma membrane	54.82	77.83
KRH59857	Soybean	cytosol	19.71	76.73
KRG95266	Soybean	cytosol	76.83	74.49
CDX91834	Canola	cytosol, peroxisome, plasma membrane	66.04	73.43
KRH77528	Soybean	mitochondrion	66.46	73.29
Solyc08g080890.2.1	Tomato	cytosol	67.71	72.58
AT1G63440.1	Thale cress	mitochondrion	75.16	72.06
Zm00001d002708_P001	Maize	mitochondrion	72.64	69.37
Os04t0556000-01	Rice	plastid	72.85	69.36
GSMUA_Achr5P12300_001	Banana	cytosol	57.86	69.26
EES11247	Sorghum	mitochondrion	72.43	68.96
TraesCS2B01G429200.2	Wheat	mitochondrion	71.8	68.91
TraesCS2D01G407800.5	Wheat	plastid	71.8	68.5
KRH77529	Soybean	cytosol	70.13	68.47
KRH27938	Soybean	plasma membrane	20.34	68.31
CDY50396	Canola	cytosol	69.39	68.04
CDY34353	Canola	mitochondrion	73.27	67.73
CDY49160	Canola	cytosol	68.97	67.63
CDY25498	Canola	mitochondrion	73.27	67.6
TraesCS2A01G410400.3	Wheat	mitochondrion	71.59	67.56
Bra003110.1-P	Field mustard	cytosol	69.08	67.45
CDX93870	Canola	endoplasmic reticulum, plasma membrane	50.84	66.44
Zm00001d002705_P002	Maize	cytosol, plastid	70.23	64.67
GSMUA_Achr1P00300_001	Banana	cytosol	57.97	62.91
KXG26864	Sorghum	cytosol, plasma membrane, plastid	70.02	61.74
Solyc11g062120.1.1	Tomato	cytosol, peroxisome, plasma membrane	18.55	59.6
Bra027641.1-P	Field mustard	mitochondrion	73.9	59.14
Solyc11g062100.1.1	Tomato	cytosol, peroxisome, plasma membrane	35.12	49.63
Solyc02g068490.2.1	Tomato	cytosol	50.31	47.86
VIT_02s0025g03630.t01	Wine grape	cytosol	79.45	39.15
Solyc01g105160.2.1	Tomato	plastid	25.47	33.47
Solyc08g061610.2.1	Tomato	plastid	27.57	29.42
Solyc02g092920.2.1	Tomato	plastid	18.87	21.92
Solyc07g009130.2.1	Tomato	plastid	19.5	14.29

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0043231
GO:GO:0046872	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd
InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299
UniProt:K4CP85	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417
InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	EnsemblPlantsGene:Solyc08g080870.2
EnsemblPlants:Solyc08g080870.2.1	TIGRFAMs:TIGR00003	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI000276BCD4
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:+:64049919..64055369

Molecular Weight (calculated)

103583.0 Da

IEP (calculated)

5.475

GRAVY (calculated)

0.139

Length

954 amino acids

Sequence
(BLAST)

001: MATVKFFSLS CLRNESSYGD FPSKAHYPSM PKYPKGFSVS SGEEKKAIFS VNGMSCSACA GSVEKAIKRL SGIKEAVVDV LNNKAQVIFY PTFVNEETIL
101: ETIEDVGFEA TLVTEETNEK TSQVCRIRIK GMTCVQKAQV ALATEVAEIQ YDPRILTHNQ LLEAIEDTGF EAILISTGED RSKILLKVDG VHTENSMSII
201: ESSLRALPGV EDVDIDPELK KLSVSYKSDT IGPRDFIQVI ESTGSGRFKA TIFPEGGGKQ SHRQEEIEYC RRSFLWSLVF TIPVFLTSMI FMYIPGLKDG
301: LDIKVVNMLS IGEILRWVLS TPVQFIIGRR FYSGSYKALR HGSANMDVLI ALGTNAAYFY SVYSVLRTSS MLISFILLGK YLEVLAKGKT SEAIAKLMNL
401: SPETASLLQL DDEGNVVKEE EIDSQLIQKN DVIKILPGAK VACDGFVIWG QSHVNESMIT GESRPLAKRK GDMVIGGTVN ENGVLHIRAT KVGSESALSQ
501: IVRLVESAQM AKAPVQKFAD RISKYFVPLV IILSLFTWLA WILAGKYDGY PKSWIPSSMD SFQLALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASRG
601: VLIKGGQALE GAQKVDCIVF DKTGTLTMGK PVVVNTKLFR SMVLREFYEL VAAAELNSEH PLAKAIVEYA KKFREDEENP RWPEVQDFES ITGHGVKAVV
701: HNKTLIVGNK SLMLDQGVSI PVDADELLAE AEELAQTGIL VSINGELSGV VSISDPVKPG AREVISLLKS MKVESKLVTG DNWGTANAIA MEVGISDVIA
801: EAKPEDKAEK VKELQSLGKV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK SNLEDVITAI DLSRKTFSRI RLNYFWAFGY NLLGIPIAAG
901: ALFPFTRFRL PPWVAGAAMA ASSVSVVCSS LLLKNYKRPK NLDNLEIGGI TVES

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.