Factsheet for AT1G63440.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032161	Potato	cytosol, plasma membrane, vacuole	11.96	90.15
CDY34353	Canola	mitochondrion	90.05	86.82
CDY25498	Canola	mitochondrion	89.75	86.36
KRH41158	Soybean	plasma membrane	57.89	84.96
VIT_02s0025g03640.t01	Wine grape	golgi, peroxisome, plasma membrane	42.11	84.48
CDY50396	Canola	cytosol	80.8	82.63
GSMUA_Achr5P12290_001	Banana	plasma membrane	46.33	82.32
CDY49160	Canola	cytosol	79.6	81.4
CDX93870	Canola	endoplasmic reticulum, plasma membrane	59.6	81.23
Bra003110.1-P	Field mustard	cytosol	79.7	81.17
KRH59857	Soybean	cytosol	19.9	80.82
Bra027641.1-P	Field mustard	mitochondrion	91.76	76.59
KRG95266	Soybean	cytosol	75.68	76.52
Solyc08g080870.2.1	Tomato	cytosol	72.06	75.16
HORVU2Hr1G097010.1	Barley	plasma membrane	50.65	75.0
KRH77528	Soybean	mitochondrion	64.42	74.1
GSMUA_Achr5P12300_001	Banana	cytosol	55.48	69.26
Zm00001d002708_P001	Maize	mitochondrion	68.24	67.97
Os04t0556000-01	Rice	plastid	68.34	67.86
TraesCS2B01G429200.2	Wheat	mitochondrion	67.24	67.3
EES11247	Sorghum	mitochondrion	67.64	67.17
TraesCS2D01G407800.5	Wheat	plastid	67.14	66.8
TraesCS2A01G410400.3	Wheat	mitochondrion	66.93	65.88
Zm00001d002705_P002	Maize	cytosol, plastid	66.73	64.09
GSMUA_Achr1P00300_001	Banana	cytosol	54.87	62.12
KXG26864	Sorghum	cytosol, plasma membrane, plastid	66.13	60.81
AT5G44790.1	Thale cress	cytosol	46.53	46.25
VIT_02s0025g03630.t01	Wine grape	cytosol	75.58	38.84
AT5G21930.1	Thale cress	plastid	26.93	30.35
AT4G33520.2	Thale cress	plastid	27.64	28.98
AT4G30120.1	Thale cress	cytosol	13.77	25.28
AT4G37270.1	Thale cress	plasma membrane, plastid	17.99	21.86
AT4G30110.1	Thale cress	plasma membrane	20.6	21.56
AT2G19110.2	Thale cress	cytosol	20.0	16.98

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	EntrezGene:842650
UniProt:A0A178W1W4	ProteinID:AAF19707.1	ProteinID:ACF95837.1	ProteinID:ACF95838.1	ProteinID:ACF95840.1	ProteinID:ACF95844.1
ProteinID:ACF95846.1	ProteinID:ACF95848.1	ProteinID:ACF95849.1	ProteinID:ACF95857.1	ProteinID:ACF95859.1	ProteinID:ACF95860.1
ProteinID:ACF95862.1	ProteinID:ACF95865.1	ProteinID:ACF95866.1	ProteinID:ACF95869.1	ProteinID:ACF95870.1	ProteinID:ACF95871.1
ProteinID:ACF95873.1	ProteinID:AEE34100.1	ArrayExpress:AT1G63440	EnsemblPlantsGene:AT1G63440	RefSeq:AT1G63440	TAIR:AT1G63440
RefSeq:AT1G63440-TAIR-G	EnsemblPlants:AT1G63440.1	TAIR:AT1G63440.1	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	Unigene:At.36129	UniProt:B5AXI8	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005507	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811
GO:GO:0006812	GO:GO:0006825	GO:GO:0006950	GO:GO:0008150	GO:GO:0010273	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0043231	GO:GO:0046688
GO:GO:0046872	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	Symbol:HMA5
InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	InterPro:IPR023214
InterPro:IPR023299	RefSeq:NP_176533.1	ProteinID:OAP12074.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403
PFAM:PF00702	PO:PO:0000084	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0007611
PO:PO:0007616	PO:PO:0009005	PO:PO:0009029	PO:PO:0009030	PO:PO:0009046	PO:PO:0009047
PO:PO:0020100	PO:PO:0025281	PRINTS:PR00119	PRINTS:PR00942	ScanProsite:PS00154	ScanProsite:PS01047
PFscan:PS50846	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417	InterPro:P_typ_ATPase	UniProt:Q9SH30	SUPFAM:SSF55008
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR00003	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525
TMHMM:TMhelix	UniParc:UPI000012571D	SEG:seg	:	:	:

Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]

Coordinates

chr1:+:23527570..23531226

Molecular Weight (calculated)

108343.0 Da

IEP (calculated)

6.374

GRAVY (calculated)

0.128

Length

995 amino acids

Sequence
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.