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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75363 Canola plastid 90.2 91.36
Bra011450.1-P Field mustard plastid 90.09 90.96
CDX68986 Canola plastid 89.36 90.6
VIT_12s0142g00400.t01 Wine grape endoplasmic reticulum, plasma membrane, plastid 22.66 78.47
Solyc01g105160.2.1 Tomato plastid 53.11 69.42
KRH58274 Soybean plasma membrane 53.32 68.66
GSMUA_Achr7P12640_001 Banana cytosol 59.22 67.31
OQU81022 Sorghum cytosol 55.74 67.22
VIT_12s0142g00330.t01 Wine grape golgi, plasma membrane 31.09 66.59
TraesCS7A01G239700.1 Wheat cytosol 55.53 65.63
KRH42155 Soybean plastid 63.96 64.78
Os08t0486100-01 Rice cytosol, plasma membrane 13.49 64.0
Zm00001d052801_P004 Maize plastid 60.06 58.88
TraesCS7D01G237500.1 Wheat plastid 59.01 58.82
TraesCS7B01G135300.1 Wheat plastid 58.9 58.72
HORVU7Hr1G048770.2 Barley endoplasmic reticulum, plasma membrane 19.18 57.59
AT5G21930.1 Thale cress plastid 37.2 39.98
AT5G44790.1 Thale cress cytosol 29.61 28.07
AT1G63440.1 Thale cress mitochondrion 28.98 27.64
AT4G30120.1 Thale cress cytosol 13.59 23.8
AT4G37270.1 Thale cress plasma membrane, plastid 18.97 21.98
AT4G30110.1 Thale cress plasma membrane 20.02 19.98
AT2G19110.2 Thale cress cytosol 20.44 16.55
Protein Annotations
Gene3D:2.70.150.20MapMan:24.1.2.1.1Gene3D:3.30.70.100Gene3D:3.40.1110.10Gene3D:3.40.50.1000PDB:5LBD
EntrezGene:829490ProteinID:AEE86239.1ProteinID:AEE86240.1EMBL:AK229051ArrayExpress:AT4G33520EnsemblPlantsGene:AT4G33520
RefSeq:AT4G33520TAIR:AT4G33520RefSeq:AT4G33520-TAIR-GEnsemblPlants:AT4G33520.2TAIR:AT4G33520.2InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfEMBL:AY059869EMBL:AY093320Unigene:At.48932
ProteinID:CAA20565.1ProteinID:CAB38810.1ProteinID:CAB80069.1EMBL:D89981GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005375GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006091GO:GO:0006810GO:GO:0006811
GO:GO:0006812GO:GO:0006825GO:GO:0008150GO:GO:0008152GO:GO:0009507GO:GO:0009536
GO:GO:0009570GO:GO:0009767GO:GO:0009941GO:GO:0009987GO:GO:0015979GO:GO:0016020
GO:GO:0016021GO:GO:0016531GO:GO:0016787GO:GO:0019829GO:GO:0030001GO:GO:0031969
GO:GO:0035434GO:GO:0046872GO:GO:0055070GO:GO:0099132InterPro:HAD-like_sfInterPro:HAD_sf
InterPro:HMA_domInterPro:HMA_dom_sfInterPro:Heavy-metal-associated_CSInterPro:IPR006121InterPro:IPR023214InterPro:IPR023299
RefSeq:NP_567924.1RefSeq:NP_974675.1InterPro:P-typ_ATPase_IBSymbol:PAA1PFAM:PF00122PFAM:PF00403
PFAM:PF00702PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PRINTS:PR00119PRINTS:PR00943ScanProsite:PS00154ScanProsite:PS01047
PFscan:PS50846PANTHER:PTHR43520PANTHER:PTHR43520:SF8InterPro:P_typ_ATPaseUniProt:Q9SZC9SUPFAM:SSF55008
SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01511TIGRFAMs:TIGR01525
TMHMM:TMhelixUniParc:UPI000012571CSEG:seg:::
Description
PAA1Copper-transporting ATPase PAA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SZC9]
Coordinates
chr4:+:16118830..16126151
Molecular Weight (calculated)
100003.0 Da
IEP (calculated)
9.024
GRAVY (calculated)
0.068
Length
949 amino acids
Sequence
(BLAST)
001: MESTLSAFST VKATAMARSS GGPSLPLLTI SKALNRHFTG ARHLHPLLLA RCSPSVRRLG GFHGSRFTSS NSALRSLGAA VLPVIRHRLE CLSSSSPSFR
101: SISSGGGSGF GGYNGGSGGG GGGGSESGDS KSKLGANASD GVSVPSSDII ILDVGGMTCG GCSASVKKIL ESQPQVASAS VNLTTETAIV WPVPEAKSVP
201: DWQKSLGETL ANHLTNCGFQ STPRDLVTEN FFKVFETKTK DKQARLKESG RELAVSWALC AVCLVGHLTH FLGVNAPWIH AIHSTGFHVS LCLITLLGPG
301: RKLVLDGIKS LLKGSPNMNT LVGLGALSSF SVSSLAAMIP KLGWKTFFEE PVMLIAFVLL GRNLEQRAKI KATSDMTGLL SVLPSKARLL LDGDLQNSTV
401: EVPCNSLSVG DLVVILPGDR VPADGVVKSG RSTIDESSFT GEPLPVTKES GSQVAAGSIN LNGTLTVEVH RSGGETAVGD IIRLVEEAQS REAPVQQLVD
501: KVAGRFTYGV MALSAATFTF WNLFGAHVLP SALHNGSPMS LALQLSCSVL VVACPCALGL ATPTAMLVGT SLGARRGLLL RGGDILEKFS LVDTVVFDKT
601: GTLTKGHPVV TEVIIPENPR HNLNDTWSEV EVLMLAAAVE SNTTHPVGKA IVKAARARNC QTMKAEDGTF TEEPGSGAVA IVNNKRVTVG TLEWVKRHGA
701: TGNSLLALEE HEINNQSVVY IGVDNTLAAV IRFEDKVRED AAQVVENLTR QGIDVYMLSG DKRNAANYVA SVVGINHERV IAGVKPAEKK NFINELQKNK
801: KIVAMVGDGI NDAAALASSN VGVAMGGGAG AASEVSPVVL MGNRLTQLLD AMELSRQTMK TVKQNLWWAF GYNIVGIPIA AGVLLPLTGT MLTPSMAGAL
901: MGVSSLGVMT NSLLLRYRFF SNRNDKNVKP EPKEGTKQPH ENTRWKQSS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.