Factsheet for Os02t0172600-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os08t0205400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G44790.1	Os08t0205400-01	AT1G66240.1	17223078

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06348	Sorghum	cytosol	87.41	87.76
TraesCS6D01G146500.1	Wheat	cytosol	87.31	87.58
Zm00001d053783_P001	Maize	plasma membrane	86.91	87.17
TraesCS6A01G156900.1	Wheat	cytosol	86.81	87.16
TraesCS6B01G184800.1	Wheat	cytosol	84.12	86.63
Os06t0665800-01	Rice	cytosol	84.12	83.95
GSMUA_Achr8P06970_001	Banana	cytosol	73.43	77.86
GSMUA_Achr5P26800_001	Banana	cytosol	72.33	77.35
CDY67984	Canola	cytosol, peroxisome, plasma membrane	17.88	73.06
VIT_01s0011g01360.t01	Wine grape	cytosol	70.53	70.6
HORVU6Hr1G031960.1	Barley	plastid	40.46	70.56
KRH37212	Soybean	cytosol	68.13	69.17
KRH12191	Soybean	cytosol	68.63	68.98
PGSC0003DMT400024409	Potato	cytosol	68.83	68.76
Solyc02g068490.2.1	Tomato	cytosol	68.83	68.69
KRH58516	Soybean	cytosol	67.83	68.31
AT5G44790.1	Thale cress	cytosol	68.13	68.13
CDY50771	Canola	cytosol	67.63	68.11
CDY39400	Canola	cytosol	67.63	67.77
KRH42397	Soybean	cytosol	67.23	67.71
Bra025102.1-P	Field mustard	cytosol	67.03	67.3
CDY26408	Canola	golgi, nucleus, plasma membrane	11.49	66.47
Bra027573.1-P	Field mustard	cytosol	65.63	65.57
CDY69037	Canola	cytosol	35.56	60.96
CDY67659	Canola	cytosol	35.66	60.0
Os04t0556000-01	Rice	plastid	46.65	46.61
Os08t0486100-01	Rice	cytosol, plasma membrane	7.69	38.5
Os03t0178100-00	Rice	plastid	25.67	28.49
Os06t0690700-01	Rice	plastid	18.08	22.02
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	21.58	21.51
Os06t0700700-02	Rice	plasma membrane	21.78	20.43

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	EntrezGene:4328448
UniProt:A0A0N7KES2	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:BAS77209.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005507
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121
InterPro:IPR023214	InterPro:IPR023299	EnsemblPlantsGene:Os02g0172600	EnsemblPlants:Os02t0172600-00	InterPro:P-typ_ATPase_IB	PFAM:PF00122
PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	ScanProsite:PS01047
PFscan:PS50846	PANTHER:PTHR43520	PANTHER:PTHR43520:SF14	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR00003	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix
UniParc:UPI0003939256	RefSeq:XP_015626913.1	SEG:seg	:	:	:

Description

HEAVY METAL ATPASE 6Similar to heavy metal ATPase. (Os02t0172600-00)

Coordinates

chr2:-:3950459..3955971

Molecular Weight (calculated)

107273.0 Da

IEP (calculated)

5.204

GRAVY (calculated)

0.325

Length

1001 amino acids

Sequence
(BLAST)

0001: MAHLQLTPLA AGGGRGGADE MEEVALLGPE SYDEEAAAAP GPEEEEGMRR VQVRVTGMTC SACTAAVEAA VSARRGVGGV AVSLLQSRAR VVFDPALAKE
0101: EDIIEAIEDA GFEAELLPDS TVSQPKLQNT LSGQFRIGGM TCAACVNSVE GILKKLPGVK RAVVALATSL GEVEYDPSVI SKDEIVQAIE DAGFEAALLQ
0201: SSEQDKVLLG LMGLHTEVDV DILHDILKKM EGLRQFNVNL VLSEAEIVFD PEVVGLRSIV DTIEMESSGR LKAHVQNPYI RAASNDAQEA SKMLHLLCSS
0301: LFLSIPVFFI RMVCPRIHFT RSLLLMHLGP FYIGDLLKWI LVSIVQFGVG KRFYVAAYRA LRHGSTNMDV LVVLGTTASY VYSVCALLYG AFTGFHPPKY
0401: FETSAMIITF VLFGKYLEVL AKGRTSDAIK KLVELVPATA LLLLKDKEGK YAAEKEIDAS LIQPGDVLKV LPGSKVPADG TVVWGTSHVD ESMVTGESAP
0501: ISKEVSSIVI GGTMNLHGIL HIQATKVGSG TVLSQIISLV ETAQMSKAPI QKFADYVAGI FVPIVVTLSL VTFIAWFLCG SLGAYPNSWV DETSNCFVFS
0601: LMFSISVVVI ACPCALGLAT PTAVMVATGV GANHGVLVKG GDALERAQNV KYVIFDKTGT LTQGKATVTS TKVFSGIDLG DFLTLVASAE ASSEHPLAKA
0701: ILDYAFHFHF FGKLPSSKDD IKKRKQQILS QWLLEVAEFS ALPGKGVQCL INGKKILVGN RTLITENGIN IPEEAESFLV DLELNAKTGV LVAYDSELIG
0801: SIGMTDPLKR EAVVVVEGLK KMGIYPVMVT GDNWRTAQAV AKEVGIEDVR AEVMPAGKAD VVRSLQKDGS VVAMVGDGIN DSPALAAADV GMAIGAGTDI
0901: AIEAADYVLV RNNLEDVITA IDLSRKTFSR IRWNYFFAMA YNIIAIPVAA GALFPFTGLQ MPPWLAGACM AFSSVSVVCS SLWLRRYRKP RLTTLLQITV
1001: E

Best Arabidopsis Sequence Match ( AT5G44790.1 )
(BLAST)

0001: MAPSRRDLQL TPVTGGSSSQ ISDMEEVGLL DSYHNEANAD DILTKIEEGR DVSGLRKIQV GVTGMTCAAC SNSVEAALMN VNGVFKASVA LLQNRADVVF
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E

Arabidopsis Description

RAN1Copper-transporting ATPase RAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.