Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0485000-01 | Rice | plasma membrane | 6.82 | 1.54 |
| CDX79636 | Canola | cytosol, nucleus, peroxisome | 5.68 | 1.06 |
| Os03t0116500-01 | Rice | cytosol | 3.41 | 0.68 |
| Bra023038.1-P | Field mustard | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os01t0974900-00 | EnsemblPlantsGene:Os01g0974900 | GO:GO:0000502 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| ProteinID:BAD87841.1 | ProteinID:BAF07473.1 | ProteinID:BAS76459.1 | UniParc:UPI00004C2AC7 | UniProt:Q5JL19 | MapMan:35.1 |
Description
Similar to 26S proteasome non-ATPase regulatory subunit 6. (Os01t0974900-00)
Coordinates
chr1:+:43077383..43077649
Molecular Weight (calculated)
9645.6 Da
IEP (calculated)
4.393
GRAVY (calculated)
0.027
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MDAGSEEAKQ EQHRVLAHKL FLLSHPDLND LAKVALRSDA LDAVKSDGMA LLFESLAVNG VLEPDDALLV EMRVRIDEEV PQAIVVRA
001: MDGGAEGSQQ PHLILANKLF LLTHPDVPDI EKVQLKSEVL DFIRSHGMAP LYETLIASSV LDLDQSLLES MRAANEEELK KLDEKIADAE ENLGESEVRE
101: AHLAKALYFI RISDKEKALE QLKLTEGKTV AVGQKMDVVF YTLQLAFFYM DFDLVSKSID KAKKLFEEGG DWERKNRLKV YEGLYCMSTR NFKKAASLFL
201: DSISTFTTYE IFPYETFIFY TVLTSIITLD RVSLKQKVVD APEILTVLGK IPFLSEFLNS LYECQYKAFF SAFAGMAVQI KYDRYLYPHF RFYMREVRTV
301: VYSQFLESYK SVTVEAMAKA FGVSVDFIDQ ELSRFIAAGK LHCKIDKVAG VLETNRPDAK NALYQATIKQ GDFLLNRIQK LSRVIDL
101: AHLAKALYFI RISDKEKALE QLKLTEGKTV AVGQKMDVVF YTLQLAFFYM DFDLVSKSID KAKKLFEEGG DWERKNRLKV YEGLYCMSTR NFKKAASLFL
201: DSISTFTTYE IFPYETFIFY TVLTSIITLD RVSLKQKVVD APEILTVLGK IPFLSEFLNS LYECQYKAFF SAFAGMAVQI KYDRYLYPHF RFYMREVRTV
301: VYSQFLESYK SVTVEAMAKA FGVSVDFIDQ ELSRFIAAGK LHCKIDKVAG VLETNRPDAK NALYQATIKQ GDFLLNRIQK LSRVIDL
Arabidopsis Description
RPN726S proteasome non-ATPase regulatory subunit 6 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93Y35]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.