CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023038.1-P	Field mustard	nucleus	5.51	25.0
CDX92654	Canola	cytosol	12.08	14.73
CDY03414	Canola	cytosol	12.08	14.73
CDY34315	Canola	cytosol	12.08	14.73
CDY65304	Canola	cytosol	11.86	12.64
CDY52333	Canola	cytosol	11.86	12.61
CDY34374	Canola	nucleus	3.18	12.1
CDX67853	Canola	cytosol	11.44	11.92
CDY45683	Canola	cytosol	11.44	11.92
CDY08956	Canola	extracellular, golgi	7.63	10.78
CDX75945	Canola	cytosol	5.51	6.91
Os01t0974900-00	Rice	cytosol	1.06	5.68

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.570	Gene3D:3.30.710.10	MapMan:50.2.7	GO:A0A078CR46	EnsemblPlants:CDX79636
ProteinID:CDX79636	ProteinID:CDX79636.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00132420001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PANTHER:PTHR24349	PANTHER:PTHR24349:SF161
InterPro:Prot_kinase_dom	InterPro:SKP1-like_dim_sf	SMART:SM00220	SUPFAM:SSF56112	SUPFAM:SSF81382	TMHMM:TMhelix
UniPathway:UPA00143	UniParc:UPI0004EEBD31	SEG:seg	:	:	:

Description

BnaC03g19720D

Coordinates

chrLK031818:-:1283372..1288764

Molecular Weight (calculated)

53781.5 Da

IEP (calculated)

8.186

GRAVY (calculated)

-0.346

Length

472 amino acids

Sequence
(BLAST)

001: MGPDNENQSC ENLHDTSAII DGRVGSAHDR YVLGATWFAV TETTIPIARE YKCYKLRSPC SSGTRKKNKS EEEEEEEKKK RASSHDCRQN NLGRKLGHMQ
101: FGIDVYVYRE RNMDRVCVGG ELFARIVERE YYSERKAAYL AKAILDCCLK GENFTDVVGS PQYIAPEVLN KDYSTEADIC SASVMVYMLL SGSAPFWGGM
201: IVTLITASIF GSDKTSGEPL SIEAYAARYK GRTKIIRLLF IAKHLDQESC QIQALKMPYY EIKKGNNVLL FRDVGERCKY KLGSDYMLDL AWIEAVDTRW
301: QELGHHFYEF GSMSDALNCY NMIIKFKTSQ SEIFVHIPLT LFALPTVPIC ALGFAHLKLK HYKLAALKTI KENVRTLDAK LMKVNQLTFF DLINAADYFG
401: IPSLIDLAFQ KVAGLIEGHP WIRDEGSPKS TRYTARYNCV ESLEEVFTNR QAQEYGFKGD CRKTFRRRDS RA

Best Arabidopsis Sequence Match ( AT2G35890.1 )
(BLAST)

001: MGNVCVHMVN NCVDTKSNSW VRPTDLIMDH PLKPQLQDKP PQPMLMNKDD DKTKLNDTHG DPKLLEGKEK PAQKQTSQGQ GGRKCSDEEY KKRAIACANS
101: KRKAHNVRRL MSAGLQAESV LKTKTGHLKE YYNLGSKLGH GQFGTTFVCV EKGTGEEYAC KSIPKRKLEN EEDVEDVRRE IEIMKHLLGQ PNVISIKGAY
201: EDSVAVHMVM ELCRGGELFD RIVERGHYSE RKAAHLAKVI LGVVQTCHSL GVMHRDLKPE NFLFVNDDED SPLKAIDFGL SMFLKPGENF TDVVGSPYYI
301: APEVLNKNYG PEADIWSAGV MIYVLLSGSA PFWGETEEEI FNEVLEGELD LTSDPWPQVS ESAKDLIRKM LERNPIQRLT AQQVLCHPWI RDEGNAPDTP
401: LDTTVLSRLK KFSATDKLKK MALRVIAERL SEEEIHELRE TFKTIDSGKS GRVTYKELKN GLERFNTNLD NSDINSLMQI PTDVHLEDTV DYNEFIEAIV
501: RLRQIQEEEA NDRLESSTKV

Arabidopsis Description

CPK25Calcium-dependent protein kinase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ61]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.