Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0147900-01 | Rice | plastid | 13.88 | 12.96 |
| Os02t0103800-01 | Rice | plastid | 12.46 | 12.02 |
| Os06t0107700-01 | Rice | plastid | 12.18 | 11.88 |
| Os03t0784700-01 | Rice | plastid | 11.9 | 11.11 |
Protein Annotations
| MapMan:24.2.1.5 | ProteinID:BAD07824.1 | ProteinID:BAF07520.1 | ProteinID:BAS76539.1 | ProteinID:EEE56133.1 | InterPro:EamA_dom |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:Os02g0103600 |
| EnsemblPlants:Os02t0103600-01 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF25 | UniProt:Q6ZFJ6 | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI0000236807 | InterPro:WAT1-related | SEG:seg | : | : |
Description
Protein of unknown function DUF6, transmembrane domain containing protein. (Os02t0103600-01)
Coordinates
chr2:-:175818..179370
Molecular Weight (calculated)
38263.8 Da
IEP (calculated)
9.996
GRAVY (calculated)
0.695
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MNWVEFLKPV VAMLVFDTLF ALMTALVKKA LADGLNHVVF ITLRQFVAAV LLAPIAYFKE RNTRPRFTTE IFAYMFMSAL LGGLCAQYLF FLGLSYTTAT
101: LTATFSNMTP VFTFLIAIPL QLETVDVRSK AGLAKVIGTL MSVGGATLLG LYKGAALTHT TSSVQEHGAK GITSNSSSIS KERWMLGSVL LVLNCISFSL
201: WMLLQGKLTK KYPAVFSSTA FMTSFSSMQA GVVALTTQRR LSVWLIRGNI QIIAVVFAGV GVSGIGYVLM TWCIEKKGPV FTAGFMPLIQ IMAALIDLFF
301: LHEQIFLGSA IGAALVIGGL YLLLWGKSKE ASATALLAKA VEQDGEKKEN LEA
101: LTATFSNMTP VFTFLIAIPL QLETVDVRSK AGLAKVIGTL MSVGGATLLG LYKGAALTHT TSSVQEHGAK GITSNSSSIS KERWMLGSVL LVLNCISFSL
201: WMLLQGKLTK KYPAVFSSTA FMTSFSSMQA GVVALTTQRR LSVWLIRGNI QIIAVVFAGV GVSGIGYVLM TWCIEKKGPV FTAGFMPLIQ IMAALIDLFF
301: LHEQIFLGSA IGAALVIGGL YLLLWGKSKE ASATALLAKA VEQDGEKKEN LEA
001: MVKFDTKLWK AVLMMSMINI GLSVVNVMFK KMIDEGLNRM VATTYRLAVG TLFLIPFAIF LERHNRPKLT GRILCSLFFS ALLGTSLVQY FFLIGLEYTS
101: STFSLAFSNM VPSVTFALAL VFRQETLNIK SNVGRAKLLG TMICICGALV LTLYKGTALS REHSTHMETH TRTDSTGAMT QKWAMGSIML VISIIIWSSW
201: FIVQAKISRV YPCQYTSTTI LSFFGVIQSA LLSLISERST SMWVVKDKFQ VLALLYSGIV GSGLCYVGMS WCLRQRGAVF TSSFIPLIQV FAAIFSFSFL
301: HEQIYCGSVI GSMVIIVGLY ILLWGKSKDK SASVTKQEPL DLDIEGCGTA PKELNSTAHQ VSAK
101: STFSLAFSNM VPSVTFALAL VFRQETLNIK SNVGRAKLLG TMICICGALV LTLYKGTALS REHSTHMETH TRTDSTGAMT QKWAMGSIML VISIIIWSSW
201: FIVQAKISRV YPCQYTSTTI LSFFGVIQSA LLSLISERST SMWVVKDKFQ VLALLYSGIV GSGLCYVGMS WCLRQRGAVF TSSFIPLIQV FAAIFSFSFL
301: HEQIYCGSVI GSMVIIVGLY ILLWGKSKDK SASVTKQEPL DLDIEGCGTA PKELNSTAHQ VSAK
Arabidopsis Description
WAT1-related protein At3g30340 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI65]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.