Factsheet for Os07t0147900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88435	Sorghum	plastid	86.51	85.83
TraesCS2D01G253400.1	Wheat	golgi	84.39	84.39
TraesCS2A01G252800.1	Wheat	plastid	83.86	84.08
Os03t0784700-01	Rice	plastid	82.54	82.54
GSMUA_Achr4P28350_001	Banana	plastid	79.37	80.43
KRH36793	Soybean	plastid	80.16	80.37
KRH11782	Soybean	nucleus, plastid	80.16	80.37
VIT_10s0003g04880.t01	Wine grape	plastid	78.84	79.05
PGSC0003DMT400010484	Potato	plastid	77.51	78.34
Zm00001d018794_P003	Maize	plastid	83.6	78.22
GSMUA_Achr4P31670_001	Banana	plastid	78.84	78.22
Solyc02g024050.2.1	Tomato	extracellular	77.25	78.07
PGSC0003DMT400030830	Potato	extracellular, plastid	77.25	78.07
CDY46362	Canola	plastid	76.72	76.72
Bra029574.1-P	Field mustard	plastid	76.72	76.72
CDY39167	Canola	plastid	76.72	76.72
AT4G05390.1	Thale cress	plastid	76.19	76.19
AT1G30510.2	Thale cress	plastid	76.19	75.39
CDY09570	Canola	plastid	75.66	74.87
HORVU2Hr1G038830.1	Barley	plastid	84.92	74.65
CDY02299	Canola	plastid	75.13	74.35
TraesCS2B01G272500.1	Wheat	plastid	42.06	72.27
Bra032396.1-P	Field mustard	peroxisome, plastid, vacuole	74.87	67.7
CDY51794	Canola	plastid	41.01	64.05
Os06t0107700-01	Rice	plastid	40.74	42.54
Os02t0103800-01	Rice	plastid	40.74	42.08
CDY40011	Canola	cytosol, mitochondrion, peroxisome	25.4	40.85
CDY20886	Canola	mitochondrion, plastid	23.02	40.28
Os02t0103600-01	Rice	plasma membrane	12.96	13.88

Protein Annotations

KEGG:00195+1.18.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.80	EntrezGene:4342399	MapMan:50.1.17	EMBL:AK072768
ProteinID:BAC83340.1	ProteinID:BAF20804.1	ProteinID:BAT00063.1	ncoils:Coil	EMBL:D87547	ProteinID:EAZ38695.1
InterPro:FNR	InterPro:FNR_plant_Cyanobacteria	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824
GO:GO:0004324	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0015979	GO:GO:0016491
GO:GO:0055114	InterPro:IPR017927	UniProt:O23877	EnsemblPlantsGene:Os07g0147900	EnsemblPlants:Os07t0147900-01	InterPro:OxRdtase_FAD/NAD-bd
PFAM:PF00175	PIRSF:PIRSF000361	PIRSF:PIRSF501178	PRINTS:PR00371	PFscan:PS51384	PANTHER:PTHR43314
PANTHER:PTHR43314:SF4	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	UniParc:UPI000012A635	RefSeq:XP_015646844.1
SEG:seg	:	:	:	:	:

Description

Similar to Ferredoxin-NADP reductase precursor (Fragment). (Os07t0147900-01);Similar to Ferredoxin--NADP reductase. (Os07t0147900-02)

Coordinates

chr7:-:2476904..2480167

Molecular Weight (calculated)

41816.8 Da

IEP (calculated)

8.974

GRAVY (calculated)

-0.535

Length

378 amino acids

Sequence
(BLAST)

001: MASALGAQAS VAAPIGAGGY GRSSSSKGSN TVNFCNKSWI GTTLAWESKA LKSRHMNKIF SMSVQQASKS KVAVKPLELD NAKEPPLNLY KPKEPYTATI
101: VSVERLVGPK APGETCHIVI DHGGNVPYWE GQSYGVIPPG ENPKKPGSPN TVRLYSIAST RYGDSFDGKT ASLCVRRAVY YDPETGKEDP TKKGICSNFL
201: CDSKPGDKVQ ITGPSGKIML LPEDDPNATH IMIATGTGVA PYRGYLRRMF MEDVPSFKFG GLAWLFLGVA NTDSLLYDEE FTNYLQQYPD NFRYDKALSR
301: EQKNKNGGKM YVQDKIEEYS DEIFKLLDGG AHIYFCGLKG MMPGIQDTLK RVAEQRGESW EQKLSQLKKN KQWHVEVY

Best Arabidopsis Sequence Match ( AT4G05390.1 )
(BLAST)

001: MALSTTPSQM SVALPTRIDG SSRSMIKVQS ISFTDKSWGP PLLRLDSKSR SLGVKKRSTI CMSLQQSSKS KVLVTPLELE DPKETPLNLF RPKEPYTATI
101: VSVERIVGPQ APGETCHIVI DHDGNVPYWE GQSYGVIPPG ENPKKPGAPH NVRLYSIAST RYGDSFDGKT ASLCVRRAIY YDPETGKEDP SKAGVCSNFL
201: CNAKPGDKVK ITGPSGKVML LPEDDPKATH IMIATGTGVA PYRGYLRRMF MENVPNFKFD GLAWLFLGVA NSDSLLYDEE FAGYRKDYPE NFRYDKALSR
301: EEKNKKGGKM YVQDKIEEYS DEIFKLLDNG AHIYFCGLKG MMPGIQDTLK RVAEERGESW EQKLTQLRKN KQWHVEVY

Arabidopsis Description

RFNR1Ferredoxin--NADP reductase, root isozyme 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0V6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.