Factsheet for Bra032396.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, vacuole

Predictor Summary:

plastid 6
peroxisome 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02299	Canola	plastid	90.67	99.21
CDY09570	Canola	plastid	88.04	96.34
AT1G30510.2	Thale cress	plastid	83.01	90.84
KRH11782	Soybean	nucleus, plastid	71.53	79.31
KRH36793	Soybean	plastid	70.1	77.72
PGSC0003DMT400010484	Potato	plastid	69.14	77.27
VIT_10s0003g04880.t01	Wine grape	plastid	69.62	77.19
GSMUA_Achr4P28350_001	Banana	plastid	68.66	76.94
PGSC0003DMT400030830	Potato	extracellular, plastid	68.66	76.74
Bra029574.1-P	Field mustard	plastid	69.14	76.45
Solyc02g024050.2.1	Tomato	extracellular	68.18	76.2
GSMUA_Achr4P31670_001	Banana	plastid	68.66	75.33
EER90782	Sorghum	plastid	68.18	75.0
Os07t0147900-01	Rice	plastid	67.7	74.87
OQU88435	Sorghum	plastid	67.7	74.28
TraesCS2A01G252800.1	Wheat	plastid	65.79	72.94
TraesCS5B01G424900.1	Wheat	plastid	64.83	72.65
Os03t0784700-01	Rice	plastid	65.55	72.49
TraesCS2D01G253400.1	Wheat	golgi	65.55	72.49
TraesCS5A01G423000.1	Wheat	plastid	65.07	72.34
TraesCS5D01G431300.1	Wheat	plastid	65.07	72.34
Zm00001d034345_P001	Maize	plastid	67.46	71.94
Zm00001d018794_P003	Maize	plastid	67.7	70.05
HORVU5Hr1G103180.1	Barley	plastid	64.35	69.69
HORVU2Hr1G038830.1	Barley	plastid	66.03	64.19
TraesCS2B01G272500.1	Wheat	plastid	31.58	60.0
Bra037182.1-P	Field mustard	plastid	39.47	45.45
Bra012203.1-P	Field mustard	plastid	37.08	42.23
Bra016481.1-P	Field mustard	plastid	36.36	41.76
Bra012057.1-P	Field mustard	plastid	16.03	38.29

Protein Annotations

KEGG:00195+1.18.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.17	EnsemblPlantsGene:Bra032396	EnsemblPlants:Bra032396.1
EnsemblPlants:Bra032396.1-P	InterPro:FNR	InterPro:FNR_plant_Cyanobacteria	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674
GO:GO:0003824	GO:GO:0004324	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0016491	GO:GO:0055114	InterPro:IPR017927	UniProt:M4EUB4	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175
PIRSF:PIRSF000361	PIRSF:PIRSF501178	PRINTS:PR00371	PFscan:PS51384	PANTHER:PTHR43314	PANTHER:PTHR43314:SF6
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	UniParc:UPI0002542556	SEG:seg	:

Description

AT1G30510 (E=2e-201) ATRFNR2 | ATRFNR2 (ROOT FNR 2); FAD binding / NADP or NADPH binding / electron carrier/ ferredoxin-NADP+ reductase/ oxidoreductase

Coordinates

chrA09:+:21757292..21759061

Molecular Weight (calculated)

46674.5 Da

IEP (calculated)

7.725

GRAVY (calculated)

-0.398

Length

418 amino acids

Sequence
(BLAST)

001: MSHSAVSQAA AVSVSIGNER SLTRSVFKLC PVTFLEICLL DFLIASEFDL KPSFACVVSI FILQQNNSIS FNTKPWSSSL ALTQKTSTIR DAKRYSNTTL
101: CMSVQQASSS KVNVSPVELE DPTDPPLNLY KPKDSYTAKI VSVERVVGPK APGETCHIVI DHDGNLPYWE GQSYGVIPPG ENPKKPGAPH NVRLYSIAST
201: RYGDFFDGKT ASLCVRRAVY YDPETGKEDP SKNGVCSNFL CDSKPGDKIQ ITGPSGKVML LPENDPNATH IMIATGTGVA PYRGYLRRLF MENVPNYKFG
301: GLAWLFLGVA NTDSLLYDDE FSKYLKDHPD HFRFDKALSR EEKNKKGGKM YVQDKIEEYS DEIFKLLDNG AHIYFCGLKG MMPGIQDTLK RVAEERGESW
401: DAKLSQLRKN KQWHVEVY

Best Arabidopsis Sequence Match ( AT1G30510.2 )
(BLAST)

001: MSHSAVSQAG AVSVSIENQR SLRRSVFKQN NSISFNSKSW SSSLALNQKT TSIRDGKRYP STTICMSVQQ TSSSKVTVSP IELEDPKDPP LNLYKPKESY
101: TAKIVSVERV VGPKAPGETC HIVIDHDGNL PYWEGQSYGV IPPGENPKKP GAPHNVRLYS IASTRYGDFF DGKTASLCVR RAVYYDPETG KEDPSKNGVC
201: SNFLCDSKPG DKIQITGPSG KVMLLPESDP NATHIMIATG TGVAPYRGYL RRMFMENVPN KTFSGLAWLF LGVANTDSLL YDEEFTKYLK DHPDNFRFDK
301: ALSREEKNKK GGKMYVQDKI EEYSDEIFKL LDNGAHIYFC GLKGMMPGIQ DTLKRVAEER GESWDLKLSQ LRKNKQWHVE VY

Arabidopsis Description

RFNR2Ferredoxin--NADP reductase, root isozyme 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S9P8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.