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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 11
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra013653.1-P
Bra019349.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G66190.1 Bra013653.1-P AT4G22890.1 18243102
AT5G66190.1 Bra019349.1-P AT4G22890.1 18243102
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18592 Canola plastid 99.45 99.72
AT5G66190.1 Thale cress plastid 88.43 89.17
KRH69775 Soybean plastid 83.2 83.43
KRH08061 Soybean nucleus, plastid 83.2 83.43
KRH28804 Soybean plastid 82.09 82.32
VIT_04s0023g03510.t01 Wine grape plastid 81.54 81.77
GSMUA_Achr11P... Banana plastid 79.06 80.17
Solyc02g062130.2.1 Tomato plastid 79.34 79.56
GSMUA_Achr1P02830_001 Banana plastid 78.79 79.44
PGSC0003DMT400009192 Potato extracellular 78.79 79.01
EES04249 Sorghum plastid 75.76 74.73
Zm00001d045575_P001 Maize plastid 73.0 74.65
EER89050 Sorghum plastid 73.83 74.24
TraesCS6B01G015000.1 Wheat plastid 73.55 73.55
TraesCS6D01G012200.1 Wheat plastid, unclear 72.73 73.13
Solyc02g083810.2.1 Tomato plastid 74.38 72.97
Os06t0107700-01 Rice plastid 72.73 72.93
Zm00001d011833_P001 Maize plastid 74.1 72.9
Bra012203.1-P Field mustard plastid 73.55 72.75
TraesCS6A01G009200.1 Wheat plastid 72.73 72.73
TraesCS7D01G016800.1 Wheat plastid 72.45 72.65
Bra016481.1-P Field mustard plastid 72.73 72.53
Os02t0103800-01 Rice plastid 72.73 72.13
TraesCS4A01G472500.1 Wheat plastid 71.9 72.1
TraesCS7A01G020500.1 Wheat plastid 71.63 72.02
Bra012057.1-P Field mustard plastid 33.06 68.57
HORVU7Hr1G002210.8 Barley plastid 66.94 67.5
GSMUA_Achr8P13460_001 Banana plastid 78.24 67.3
HORVU6Hr1G000620.2 Barley plastid 72.18 65.5
Zm00001d042049_P001 Maize plastid 75.21 56.06
Bra029574.1-P Field mustard plastid 45.18 43.39
Bra032396.1-P Field mustard peroxisome, plastid, vacuole 45.45 39.47
Protein Annotations
KEGG:00195+1.18.1.2MapMan:1.1.5.2.1Gene3D:2.40.30.10Gene3D:3.40.50.80EnsemblPlantsGene:Bra037182EnsemblPlants:Bra037182.1
EnsemblPlants:Bra037182.1-PInterPro:FNRInterPro:FNR_plant_CyanobacteriaInterPro:Fd_Rdtase_FAD-bdInterPro:Flavoprot_Pyr_Nucl_cyt_RdtaseGO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003824GO:GO:0004324GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005576GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006091
GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0008266GO:GO:0009507GO:GO:0009534
GO:GO:0009535GO:GO:0009536GO:GO:0009570GO:GO:0009579GO:GO:0009605GO:GO:0009607
GO:GO:0009767GO:GO:0009941GO:GO:0009987GO:GO:0015979GO:GO:0016020GO:GO:0016491
GO:GO:0019904GO:GO:0031977GO:GO:0042742GO:GO:0045156GO:GO:0045157GO:GO:0048046
GO:GO:0055114InterPro:IPR017927UniProt:M4F7X1InterPro:OxRdtase_FAD/NAD-bdPFAM:PF00175PIRSF:PIRSF000361
PIRSF:PIRSF501178PRINTS:PR00371PFscan:PS51384PANTHER:PTHR43314PANTHER:PTHR43314:SF7InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF52343SUPFAM:SSF63380UniParc:UPI0002541C90SEG:seg::
Description
AT5G66190 (E=1e-179) ATLFNR1, FNR1 | FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1); NADPH dehydrogenase/ electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis/ electron transporter, transferring electrons within the noncyclic electron transp
Coordinates
chrA09:-:4115902..4117695
Molecular Weight (calculated)
40653.8 Da
IEP (calculated)
7.712
GRAVY (calculated)
-0.400
Length
363 amino acids
Sequence
(BLAST)
001: MAAAAAIGAA VSYPSSKSSS LPSKTSFVSP QRIFLNNKST LCYREACVYG GRVKAQVSTE APVKVAKESK KQEEGIVVNK FKPKDPYTGR CLLNTRITGD
101: DAPGETWHIV FTTEGEVPYR EGQSIGIIPE GIDKNGKPHK LRLYSIASSA IGDFGDSKTV SLCVKRLVYT NESGEVVKGV CSNFLCDLKP GDEAKITGPV
201: GKEMLMPKDP NATIIMLGTG TGIAPFRSFL WKMFFEEHED YKFNGLAWLF LGVPTSSSLL YKEEFEKMKE KNPENFRLDF AVSREQTNDK GEKMYIQTRM
301: AEYAEELWEL LKKDNTFVYM CGLKGMEKGI DEIMVSLAAK DGIDWFEYKK QLKKSEQWNV EVY
Best Arabidopsis Sequence Match ( AT5G66190.1 )
(BLAST)
001: MAAAISAAVS LPSSKSSSLL TKISSVSPQR IFLKKSTVCY RRVVSVKAQV TTDTTEAPPV KVVKESKKQE EGIVVNKFKP KNPYTGRCLL NTKITGDDAP
101: GETWHIVFTT EGEVPYREGQ SIGVIPEGID KNGKPHKLRL YSIASSAIGD FGDSKTVSLC VKRLVYTNDG GEIVKGVCSN FLCDLKPGDE AKITGPVGKE
201: MLMPKDPNAT IIMLGTGTGI APFRSFLWKM FFEEHEDYKF NGLAWLFLGV PTSSSLLYKE EFEKMKEKNP DNFRLDFAVS REQTNEKGEK MYIQTRMAEY
301: AEELWELLKK DNTFVYMCGL KGMEKGIDDI MVSLAAKDGI DWLEYKKQLK RSEQWNVEVY
Arabidopsis Description
LFNR1Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FKW6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.