Factsheet for Bra012057.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76652	Soybean	cytosol, peroxisome, plastid	24.57	53.75
Zm00001d023296_P002	Maize	plastid	48.57	34.27
Bra037182.1-P	Field mustard	plastid	68.57	33.06
CDY23149	Canola	endoplasmic reticulum, plastid	31.43	32.93
Zm00001d005458_P003	Maize	plastid	37.14	32.02
Bra012203.1-P	Field mustard	plastid	61.71	29.43
Bra016481.1-P	Field mustard	plastid	59.43	28.57
Zm00001d034099_P002	Maize	plastid	58.86	27.84
Bra029574.1-P	Field mustard	plastid	40.0	18.52
Bra032396.1-P	Field mustard	peroxisome, plastid, vacuole	38.29	16.03

Protein Annotations

EnsemblPlants:Bra012057.1	EnsemblPlants:Bra012057.1-P	EnsemblPlantsGene:Bra012057	Gene3D:3.40.50.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:OxRdtase_FAD/NAD-bd
PANTHER:PTHR43314	PANTHER:PTHR43314:SF7	PFAM:PF00175	PRINTS:PR00371	SEG:seg	SUPFAM:SSF52343
UniParc:UPI000254184F	UniProt:M4D6E8	MapMan:50.1.17	:	:	:

Description

AT5G66190 (E=8e-054) ATLFNR1, FNR1 | FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1); NADPH dehydrogenase/ electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis/ electron transporter, transferring electrons within the noncyclic electron transp

Coordinates

chrA07:+:10260277..10262752

Molecular Weight (calculated)

20360.9 Da

IEP (calculated)

7.258

GRAVY (calculated)

-0.368

Length

175 amino acids

Sequence
(BLAST)

001: MPEFARVASD GVVLFAGLLV KQKSKVAEFS KFGRPVTLSR VMRQRSLDPV GKEMLMPKDP NATITMLGTG TGIAPFRLFL WKMFFEEHED YKFNGLAWLY
101: LGIPTSSSLL YKEEFEKMKE KKPENFRLDF AVSREQTNEM GEEMYMKRMA EYAEELWELL KKDNTFVCMC GEGYR

Best Arabidopsis Sequence Match ( AT1G20020.1 )
(BLAST)

001: MATTMNAAVS LTSSNSSSFP ATSCAIAPER IRFTKGAFYY KSNNVVTGKR VFSIKAQITT ETDTPTPAKK VEKVSKKNEE GVIVNRYRPK EPYTGKCLLN
101: TKITADDAPG ETWHMVFSHQ GEIPYREGQS VGVIADGIDK NGKPHKVRLY SIASSALGDL GNSETVSLCV KRLVYTNDQG ETVKGVCSNF LCDLAPGSDV
201: KLTGPVGKEM LMPKDPNATV IMLATGTGIA PFRSFLWKMF FEKHDDYKFN GLAWLFLGVP TTSSLLYQEE FDKMKAKAPE NFRVDYAISR EQANDKGEKM
301: YIQTRMAQYA AELWELLKKD NTFVYMCGLK GMEKGIDDIM VSLAANDGID WFDYKKQLKK AEQWNVEVY

Arabidopsis Description

LFNR2Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W493]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.