Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012057.1-P | Field mustard | plastid | 53.75 | 24.57 |
| Zm00001d023296_P002 | Maize | plastid | 68.75 | 22.18 |
| CDY23149 | Canola | endoplasmic reticulum, plastid | 46.25 | 22.16 |
| KRH28804 | Soybean | plastid | 86.25 | 19.06 |
| KRH08061 | Soybean | nucleus, plastid | 83.75 | 18.51 |
| KRH69775 | Soybean | plastid | 83.75 | 18.51 |
| Zm00001d034099_P002 | Maize | plastid | 68.75 | 14.86 |
| Zm00001d005458_P003 | Maize | plastid | 33.75 | 13.3 |
| KRH11782 | Soybean | nucleus, plastid | 37.5 | 7.96 |
| KRH36793 | Soybean | plastid | 37.5 | 7.96 |
Protein Annotations
| EMBL:ACUP02000634 | EnsemblPlants:KRH76652 | EnsemblPlantsGene:GLYMA_01G165700 | Gene3D:3.40.50.80 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:OxRdtase_FAD/NAD-bd | PANTHER:PTHR43314 |
| PANTHER:PTHR43314:SF7 | PFAM:PF00175 | ProteinID:KRH76652 | ProteinID:KRH76652.1 | SUPFAM:SSF52343 | UniParc:UPI000294B7D1 |
| UniProt:K7K479 | MapMan:50.1.17 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:50316756..50316998
Molecular Weight (calculated)
9362.4 Da
IEP (calculated)
4.772
GRAVY (calculated)
-0.449
Length
80 amino acids
Sequence
(BLAST)
(BLAST)
1: MKDKVPDNFM LDFAVSREQT NEKGEKMYIQ TRMAQYAEEL WELLKKDNTF VYMCGLKGME KVINDIMVLL AAKDGNNTYL
001: MTLPVRLGTL SSPPKVPYRE GQSIGVIPEG IDKNGKPHKL RLYSIASSAI GDFGDSKTVS LCVKRLVYTN DGGEIVKGVC SNFLCDLKPG DEAKITGPVG
101: KEMLMPKDPN ATIIMLGTGT GIAPFRSFLW KMFFEEHEDY KFNGLAWLFL GVPTSSSLLY KEEFEKMKEK NPDNFRLDFA VSREQTNEKG EKMYIQTRMA
201: EYAEELWELL KKDNTFVYMC GLKGMEKGID DIMVSLAAKD GIDWLEYKKQ LKRSEQWNVE VY
101: KEMLMPKDPN ATIIMLGTGT GIAPFRSFLW KMFFEEHEDY KFNGLAWLFL GVPTSSSLLY KEEFEKMKEK NPDNFRLDFA VSREQTNEKG EKMYIQTRMA
201: EYAEELWELL KKDNTFVYMC GLKGMEKGID DIMVSLAAKD GIDWLEYKKQ LKRSEQWNVE VY
Arabidopsis Description
LFNR1Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FKW6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.