Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023296_P002 | Maize | plastid | 52.97 | 79.03 |
| KRH76652 | Soybean | cytosol, peroxisome, plastid | 14.86 | 68.75 |
| Bra012057.1-P | Field mustard | plastid | 27.84 | 58.86 |
| Zm00001d045575_P001 | Maize | plastid | 45.14 | 47.04 |
| Zm00001d005458_P003 | Maize | plastid | 25.14 | 45.81 |
| Zm00001d011833_P001 | Maize | plastid | 38.38 | 38.48 |
| CDY23149 | Canola | endoplasmic reticulum, plastid | 15.14 | 33.53 |
| Zm00001d042049_P001 | Maize | plastid | 39.73 | 30.18 |
| Zm00001d018794_P003 | Maize | plastid | 29.73 | 27.23 |
| Zm00001d034345_P001 | Maize | plastid | 28.11 | 26.53 |
Protein Annotations
| EnsemblPlants:Zm00001d034099_P002 | EnsemblPlants:Zm00001d034099_T002 | EnsemblPlantsGene:Zm00001d034099 | Gene3D:3.40.50.80 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase | InterPro:OxRdtase_FAD/NAD-bd |
| PANTHER:PTHR43314 | PANTHER:PTHR43314:SF3 | PFAM:PF00175 | PRINTS:PR00371 | ProteinID:ONM09567.1 | ProteinID:ONM09568.1 |
| SEG:seg | SUPFAM:SSF52343 | UniParc:UPI000220E021 | UniProt:A0A1D6L5H8 | MapMan:50.1.17 | : |
Description
Ferredoxin--NADP reductase leaf isozyme 1 chloroplastic
Coordinates
chr1:+:283986720..283990685
Molecular Weight (calculated)
42108.3 Da
IEP (calculated)
8.469
GRAVY (calculated)
-0.628
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRLSLTVTD AVAAMPFALR LGGSPALRLG SQSPSWLRFG GRDGARKALF CSTEDTRRCG SDDDAEAEEG RRRGGSRVPS DRRIRAGMRP PRLFPCACSY
101: HNAGDLQPGD NVQITGPVGK EMLMPKDPNA TIIMLATGTG IAPFRSFLWK MFFEKHDEYK FKGLGWLFLG VPTSSSLLYK EEFRKMKERA PENFRVDYAI
201: SREQTNAAGE RMYIQTRMAE YKEELWELLK KDNTYVYMCG LKGMENGIDD IMVSLAEKDD LEYFLCQSFH LSEACWNATA GQEHGDEQRS IVPLQRSSMV
301: RRKAQDDNKW RRIPTFGDWN LRDDMPVTQY LQAETSSSLC RRQRRTTTRI CSRCPSVPCQ ALQLQEGETK
101: HNAGDLQPGD NVQITGPVGK EMLMPKDPNA TIIMLATGTG IAPFRSFLWK MFFEKHDEYK FKGLGWLFLG VPTSSSLLYK EEFRKMKERA PENFRVDYAI
201: SREQTNAAGE RMYIQTRMAE YKEELWELLK KDNTYVYMCG LKGMENGIDD IMVSLAEKDD LEYFLCQSFH LSEACWNATA GQEHGDEQRS IVPLQRSSMV
301: RRKAQDDNKW RRIPTFGDWN LRDDMPVTQY LQAETSSSLC RRQRRTTTRI CSRCPSVPCQ ALQLQEGETK
001: MATTMNAAVS LTSSNSSSFP ATSCAIAPER IRFTKGAFYY KSNNVVTGKR VFSIKAQITT ETDTPTPAKK VEKVSKKNEE GVIVNRYRPK EPYTGKCLLN
101: TKITADDAPG ETWHMVFSHQ GEIPYREGQS VGVIADGIDK NGKPHKVRLY SIASSALGDL GNSETVSLCV KRLVYTNDQG ETVKGVCSNF LCDLAPGSDV
201: KLTGPVGKEM LMPKDPNATV IMLATGTGIA PFRSFLWKMF FEKHDDYKFN GLAWLFLGVP TTSSLLYQEE FDKMKAKAPE NFRVDYAISR EQANDKGEKM
301: YIQTRMAQYA AELWELLKKD NTFVYMCGLK GMEKGIDDIM VSLAANDGID WFDYKKQLKK AEQWNVEVY
101: TKITADDAPG ETWHMVFSHQ GEIPYREGQS VGVIADGIDK NGKPHKVRLY SIASSALGDL GNSETVSLCV KRLVYTNDQG ETVKGVCSNF LCDLAPGSDV
201: KLTGPVGKEM LMPKDPNATV IMLATGTGIA PFRSFLWKMF FEKHDDYKFN GLAWLFLGVP TTSSLLYQEE FDKMKAKAPE NFRVDYAISR EQANDKGEKM
301: YIQTRMAQYA AELWELLKKD NTFVYMCGLK GMEKGIDDIM VSLAANDGID WFDYKKQLKK AEQWNVEVY
Arabidopsis Description
LFNR2Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W493]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.