Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G20020.1 | KXG34948 | AT4G22890.1 | 18243102 |
| AT1G20020.1 | KXG37086 | AT4G22890.1 | 18243102 |
| AT5G66190.1 | KXG34948 | AT4G22890.1 | 18243102 |
| AT5G66190.1 | KXG37086 | AT4G22890.1 | 18243102 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045575_P001 | Maize | plastid | 85.04 | 86.48 |
| Os06t0107700-01 | Rice | plastid | 80.89 | 80.66 |
| GSMUA_Achr11P... | Banana | plastid | 77.01 | 77.65 |
| TraesCS7D01G016800.1 | Wheat | plastid | 77.29 | 77.07 |
| KRH28804 | Soybean | plastid | 76.45 | 76.24 |
| KRH08061 | Soybean | nucleus, plastid | 76.45 | 76.24 |
| EES04249 | Sorghum | plastid | 77.56 | 76.09 |
| KRH69775 | Soybean | plastid | 76.18 | 75.97 |
| TraesCS7A01G020500.1 | Wheat | plastid | 75.9 | 75.9 |
| VIT_04s0023g03510.t01 | Wine grape | plastid | 75.62 | 75.41 |
| VIT_18s0001g14450.t01 | Wine grape | cytosol, plastid | 75.35 | 74.93 |
| GSMUA_Achr1P02830_001 | Banana | plastid | 74.52 | 74.72 |
| TraesCS4A01G472500.1 | Wheat | plastid | 74.79 | 74.59 |
| CDX81408 | Canola | plastid | 74.79 | 74.38 |
| CDY18592 | Canola | plastid | 74.52 | 74.31 |
| HORVU7Hr1G002210.8 | Barley | plastid | 73.68 | 73.89 |
| Bra037182.1-P | Field mustard | plastid | 74.24 | 73.83 |
| PGSC0003DMT400009192 | Potato | extracellular | 73.96 | 73.76 |
| Solyc02g062130.2.1 | Tomato | plastid | 73.68 | 73.48 |
| AT5G66190.1 | Thale cress | plastid | 73.13 | 73.33 |
| Bra012203.1-P | Field mustard | plastid | 72.58 | 71.39 |
| CDY57601 | Canola | plastid | 72.58 | 71.39 |
| AT1G20020.1 | Thale cress | plastid | 72.85 | 71.27 |
| Bra016481.1-P | Field mustard | plastid | 71.75 | 71.15 |
| CDX83730 | Canola | plastid | 72.58 | 69.5 |
| CDY43420 | Canola | plastid | 69.81 | 69.23 |
| CDY62940 | Canola | plastid | 70.64 | 68.73 |
| Solyc02g083810.2.1 | Tomato | plastid | 69.81 | 68.11 |
| GSMUA_Achr8P13460_001 | Banana | plastid | 76.18 | 65.17 |
| CDY55097 | Canola | vacuole | 63.43 | 60.42 |
| CDX83820 | Canola | endoplasmic reticulum, plasma membrane | 21.33 | 44.51 |
| OQU88435 | Sorghum | plastid | 44.32 | 41.99 |
| EER90782 | Sorghum | plastid | 41.55 | 39.47 |
| CDY57760 | Canola | plastid | 72.3 | 26.0 |
Protein Annotations
| KEGG:00195+1.18.1.2 | MapMan:1.1.5.2.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | EntrezGene:8067895 | UniProt:C5Z269 |
| EnsemblPlants:EER89050 | ProteinID:EER89050 | ProteinID:EER89050.1 | InterPro:FNR | InterPro:FNR_plant_Cyanobacteria | InterPro:Fd_Rdtase_FAD-bd |
| InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004324 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0055114 | GO:GO:0098807 | InterPro:IPR017927 |
| InterPro:OxRdtase_FAD/NAD-bd | PFAM:PF00175 | PIRSF:PIRSF000361 | PIRSF:PIRSF501178 | PRINTS:PR00371 | PFscan:PS51384 |
| PANTHER:PTHR43314 | PANTHER:PTHR43314:SF3 | MetaCyc:PWY-101 | MetaCyc:PWY-7230 | InterPro:Riboflavin_synthase-like_b-brl | EnsemblPlantsGene:SORBI_3010G005500 |
| SUPFAM:SSF52343 | SUPFAM:SSF63380 | UniParc:UPI0001A89996 | RefSeq:XP_002437683.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:-:451673..455105
Molecular Weight (calculated)
39965.0 Da
IEP (calculated)
8.312
GRAVY (calculated)
-0.359
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTVMAAAV SFPSSSAASA VVKASPTSPC AAPHFLSYRP RPARAAIRAQ ASATDTAVEA PAKSKESKKQ EEGVVTNLYK PKEPYVGKCL LNTKITGDDA
101: PGETWHMVFS TEGKIPYKEG QSIGIIADGV DKNGKPHKLR LYSIASSALG DFGDSKTVSL CVKRLVYTNE AGEIVKGVCS NFLCDLKPGA DVQITGPVGK
201: EMLMPKDPNA NIIMLATGTG IAPFRSFLWK MFFEKHDDYK FNGLGWLFLG VPTSSSLLYK EEFEKMKEKA PENFRVDYAV SREQTNAAGE RMYIQTRMAE
301: YKEELWELLK KDNTYVYMCG LKGMEKGIDD IMVSLAEKDG IDWFDYKKKL KKGEQWNVEV Y
101: PGETWHMVFS TEGKIPYKEG QSIGIIADGV DKNGKPHKLR LYSIASSALG DFGDSKTVSL CVKRLVYTNE AGEIVKGVCS NFLCDLKPGA DVQITGPVGK
201: EMLMPKDPNA NIIMLATGTG IAPFRSFLWK MFFEKHDDYK FNGLGWLFLG VPTSSSLLYK EEFEKMKEKA PENFRVDYAV SREQTNAAGE RMYIQTRMAE
301: YKEELWELLK KDNTYVYMCG LKGMEKGIDD IMVSLAEKDG IDWFDYKKKL KKGEQWNVEV Y
001: MATTMNAAVS LTSSNSSSFP ATSCAIAPER IRFTKGAFYY KSNNVVTGKR VFSIKAQITT ETDTPTPAKK VEKVSKKNEE GVIVNRYRPK EPYTGKCLLN
101: TKITADDAPG ETWHMVFSHQ GKIPYREGQS VGVIADGIDK NGKPHKVRLY SIASSALGDL GNSETVSLCV KRLVYTNDQG ETVKGVCSNF LCDLAPGSDV
201: KLTGPVGKEM LMPKDPNATV IMLATGTGIA PFRSFLWKMF FEKHDDYKFN GLAWLFLGVP TTSSLLYQEE FDKMKAKAPE NFRVDYAISR EQANDKGEKM
301: YIQTRMAQYA AELWELLKKD NTFVYMCGLK GMEKGIDDIM VSLAANDGID WFDYKKQLKK AEQWNVEVY
101: TKITADDAPG ETWHMVFSHQ GKIPYREGQS VGVIADGIDK NGKPHKVRLY SIASSALGDL GNSETVSLCV KRLVYTNDQG ETVKGVCSNF LCDLAPGSDV
201: KLTGPVGKEM LMPKDPNATV IMLATGTGIA PFRSFLWKMF FEKHDDYKFN GLAWLFLGVP TTSSLLYQEE FDKMKAKAPE NFRVDYAISR EQANDKGEKM
301: YIQTRMAQYA AELWELLKKD NTFVYMCGLK GMEKGIDDIM VSLAANDGID WFDYKKQLKK AEQWNVEVY
Arabidopsis Description
LFNR2Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W493]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.