Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016481.1-P | Field mustard | plastid | 90.51 | 91.76 |
| CDY57601 | Canola | plastid | 91.06 | 91.55 |
| Bra012203.1-P | Field mustard | plastid | 90.51 | 91.01 |
| CDY43420 | Canola | plastid | 88.62 | 89.84 |
| CDY62940 | Canola | plastid | 88.89 | 88.41 |
| CDX83730 | Canola | plastid | 89.7 | 87.8 |
| AT5G66190.1 | Thale cress | plastid | 73.71 | 75.56 |
| Os06t0107700-01 | Rice | plastid | 73.44 | 74.86 |
| Zm00001d045575_P001 | Maize | plastid | 71.82 | 74.65 |
| EER89050 | Sorghum | plastid | 71.27 | 72.85 |
| TraesCS7A01G020500.1 | Wheat | plastid | 71.27 | 72.85 |
| TraesCS7D01G016800.1 | Wheat | plastid | 70.46 | 71.82 |
| TraesCS4A01G472500.1 | Wheat | plastid | 70.46 | 71.82 |
| EES04249 | Sorghum | plastid | 69.92 | 70.11 |
| HORVU7Hr1G002210.8 | Barley | plastid | 67.48 | 69.17 |
| Zm00001d011833_P001 | Maize | plastid | 69.11 | 69.11 |
| TraesCS6B01G015000.1 | Wheat | plastid | 67.75 | 68.87 |
| Os02t0103800-01 | Rice | plastid | 68.29 | 68.85 |
| TraesCS6A01G009200.1 | Wheat | plastid | 67.21 | 68.32 |
| TraesCS6D01G012200.1 | Wheat | plastid, unclear | 66.67 | 68.14 |
| HORVU6Hr1G000620.2 | Barley | plastid | 67.21 | 62.0 |
| Zm00001d042049_P001 | Maize | plastid | 69.11 | 52.36 |
| AT4G05390.1 | Thale cress | plastid | 42.82 | 41.8 |
| AT1G30510.2 | Thale cress | plastid | 42.28 | 40.84 |
Protein Annotations
| KEGG:00195+1.18.1.2 | MapMan:1.1.5.2.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | EntrezGene:838591 | UniProt:A0A178WE91 |
| ProteinID:AAF79911.1 | ProteinID:AEE29923.1 | ProteinID:AEE29924.2 | ProteinID:AEE29925.1 | EMBL:AK318722 | ArrayExpress:AT1G20020 |
| EnsemblPlantsGene:AT1G20020 | RefSeq:AT1G20020 | TAIR:AT1G20020 | RefSeq:AT1G20020-TAIR-G | EnsemblPlants:AT1G20020.1 | TAIR:AT1G20020.1 |
| Symbol:ATLFNR2 | EMBL:AY062739 | EMBL:AY114663 | Unigene:At.24499 | InterPro:FNR | InterPro:FNR_plant_Cyanobacteria |
| InterPro:Fd_Rdtase_FAD-bd | InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004324 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008266 | GO:GO:0009507 |
| GO:GO:0009534 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009817 | GO:GO:0009987 | GO:GO:0015979 |
| GO:GO:0016020 | GO:GO:0016491 | GO:GO:0042742 | GO:GO:0048046 | GO:GO:0055114 | GO:GO:0098807 |
| InterPro:IPR017927 | RefSeq:NP_001077566.1 | RefSeq:NP_001319047.1 | RefSeq:NP_173431.1 | ProteinID:OAP16740.1 | InterPro:OxRdtase_FAD/NAD-bd |
| PFAM:PF00175 | PIRSF:PIRSF000361 | PIRSF:PIRSF501178 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0006339 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00371 |
| PFscan:PS51384 | PANTHER:PTHR43314 | PANTHER:PTHR43314:SF5 | UniProt:Q8W493 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 |
| SUPFAM:SSF63380 | UniParc:UPI0000048292 | SEG:seg | : | : | : |
Description
LFNR2Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W493]
Coordinates
chr1:+:6942625..6945091
Molecular Weight (calculated)
41170.3 Da
IEP (calculated)
8.509
GRAVY (calculated)
-0.380
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTMNAAVS LTSSNSSSFP ATSCAIAPER IRFTKGAFYY KSNNVVTGKR VFSIKAQITT ETDTPTPAKK VEKVSKKNEE GVIVNRYRPK EPYTGKCLLN
101: TKITADDAPG ETWHMVFSHQ GEIPYREGQS VGVIADGIDK NGKPHKVRLY SIASSALGDL GNSETVSLCV KRLVYTNDQG ETVKGVCSNF LCDLAPGSDV
201: KLTGPVGKEM LMPKDPNATV IMLATGTGIA PFRSFLWKMF FEKHDDYKFN GLAWLFLGVP TTSSLLYQEE FDKMKAKAPE NFRVDYAISR EQANDKGEKM
301: YIQTRMAQYA AELWELLKKD NTFVYMCGLK GMEKGIDDIM VSLAANDGID WFDYKKQLKK AEQWNVEVY
101: TKITADDAPG ETWHMVFSHQ GEIPYREGQS VGVIADGIDK NGKPHKVRLY SIASSALGDL GNSETVSLCV KRLVYTNDQG ETVKGVCSNF LCDLAPGSDV
201: KLTGPVGKEM LMPKDPNATV IMLATGTGIA PFRSFLWKMF FEKHDDYKFN GLAWLFLGVP TTSSLLYQEE FDKMKAKAPE NFRVDYAISR EQANDKGEKM
301: YIQTRMAQYA AELWELLKKD NTFVYMCGLK GMEKGIDDIM VSLAANDGID WFDYKKQLKK AEQWNVEVY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.