Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G20020.1 | CDX94134 | AT4G22890.1 | 18243102 |
| AT1G20020.1 | CDY10819 | AT4G22890.1 | 18243102 |
| AT1G20020.1 | CDY41285 | AT4G22890.1 | 18243102 |
| AT1G20020.1 | CDY68977 | AT4G22890.1 | 18243102 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016481.1-P | Field mustard | plastid | 95.96 | 97.8 |
| CDY57601 | Canola | plastid | 91.91 | 92.92 |
| CDX83730 | Canola | plastid | 94.07 | 92.57 |
| CDY43420 | Canola | plastid | 90.3 | 92.03 |
| AT1G20020.1 | Thale cress | plastid | 88.41 | 88.89 |
| Zm00001d045575_P001 | Maize | plastid | 69.27 | 72.39 |
| Os06t0107700-01 | Rice | plastid | 70.62 | 72.38 |
| TraesCS7A01G020500.1 | Wheat | plastid | 70.35 | 72.3 |
| CDY18592 | Canola | plastid | 70.08 | 71.82 |
| TraesCS7D01G016800.1 | Wheat | plastid | 69.81 | 71.55 |
| CDX81408 | Canola | plastid | 69.54 | 71.07 |
| TraesCS4A01G472500.1 | Wheat | plastid | 69.27 | 70.99 |
| EER89050 | Sorghum | plastid | 68.73 | 70.64 |
| TraesCS6B01G015000.1 | Wheat | plastid | 67.39 | 68.87 |
| EES04249 | Sorghum | plastid | 68.19 | 68.75 |
| HORVU7Hr1G002210.8 | Barley | plastid | 66.04 | 68.06 |
| TraesCS6A01G009200.1 | Wheat | plastid | 66.31 | 67.77 |
| TraesCS6D01G012200.1 | Wheat | plastid, unclear | 65.77 | 67.59 |
| Zm00001d011833_P001 | Maize | plastid | 66.85 | 67.21 |
| Os02t0103800-01 | Rice | plastid | 66.04 | 66.94 |
| HORVU6Hr1G000620.2 | Barley | plastid | 65.5 | 60.75 |
| CDY55097 | Canola | vacuole | 59.57 | 58.31 |
| Zm00001d042049_P001 | Maize | plastid | 67.92 | 51.75 |
| CDX83820 | Canola | endoplasmic reticulum, plasma membrane | 20.22 | 43.35 |
| CDY46362 | Canola | plastid | 42.59 | 41.8 |
| CDY39167 | Canola | plastid | 42.59 | 41.8 |
| CDY09570 | Canola | plastid | 40.43 | 39.27 |
| CDY02299 | Canola | plastid | 40.43 | 39.27 |
| CDY51794 | Canola | plastid | 25.61 | 39.26 |
| CDY23149 | Canola | endoplasmic reticulum, plastid | 16.44 | 36.53 |
| CDY40011 | Canola | cytosol, mitochondrion, peroxisome | 17.25 | 27.23 |
| CDY57760 | Canola | plastid | 69.81 | 25.8 |
| CDY20886 | Canola | mitochondrion, plastid | 14.56 | 25.0 |
Protein Annotations
| KEGG:00195+1.18.1.2 | MapMan:1.1.5.2.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | GO:A0A078JAR5 | UniProt:A0A078JAR5 |
| EnsemblPlants:CDY62940 | ProteinID:CDY62940 | ProteinID:CDY62940.1 | InterPro:FNR | InterPro:FNR_plant_Cyanobacteria | InterPro:Fd_Rdtase_FAD-bd |
| InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004324 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00037779001 | InterPro:IPR017927 | InterPro:OxRdtase_FAD-bd_dom | InterPro:OxRdtase_FAD/NAD-bd |
| PFAM:PF00175 | PFAM:PF00970 | PIRSF:PIRSF000361 | PIRSF:PIRSF501178 | PRINTS:PR00371 | PFscan:PS51384 |
| PANTHER:PTHR43314 | PANTHER:PTHR43314:SF5 | MetaCyc:PWY-101 | MetaCyc:PWY-7230 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 |
| SUPFAM:SSF63380 | UniParc:UPI0004EEB3C9 | SEG:seg | : | : | : |
Description
BnaA08g31180DBnaA08g31180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAR5]
Coordinates
chrLK034221:-:13222..15516
Molecular Weight (calculated)
40998.9 Da
IEP (calculated)
8.323
GRAVY (calculated)
-0.388
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MATALNAAVS LTSSKSSSLP ATSCAIAPER IRFGKGGFSY KSNNVATSRR VVSVRAEVTT DTPPAVKKVE KESKKNEEGV ITNKYRPKEP YTGKVLLNTK
101: ITADDAPGET WHMVFSHQGE IPYREGQSVG VIADGIDKNG KPHKVRLYSI ASSALGDLGN SETVSLCVKR LVYTNDAGEV VKGVCSNFLC DLKPGSDVKL
201: TGPVGKEMLM PKDPNATVIM LATGTGIAPF RSFLWKMFFE KHDDYKASEC SSWLFLGVPT TSSLLYTEAH THFNSSSAKA PENFRVDYAI SREETNDKGE
301: KMYIQTRMAQ YAPELWELLK KDNTFVYMCG LKGMEKGIDD IMVSLAANDG IDWFDYKKQL KKAEQWNVEV Y
101: ITADDAPGET WHMVFSHQGE IPYREGQSVG VIADGIDKNG KPHKVRLYSI ASSALGDLGN SETVSLCVKR LVYTNDAGEV VKGVCSNFLC DLKPGSDVKL
201: TGPVGKEMLM PKDPNATVIM LATGTGIAPF RSFLWKMFFE KHDDYKASEC SSWLFLGVPT TSSLLYTEAH THFNSSSAKA PENFRVDYAI SREETNDKGE
301: KMYIQTRMAQ YAPELWELLK KDNTFVYMCG LKGMEKGIDD IMVSLAANDG IDWFDYKKQL KKAEQWNVEV Y
001: MATTMNAAVS LTSSNSSSFP ATSCAIAPER IRFTKGAFYY KSNNVVTGKR VFSIKAQITT ETDTPTPAKK VEKVSKKNEE GVIVNRYRPK EPYTGKCLLN
101: TKITADDAPG ETWHMVFSHQ GEIPYREGQS VGVIADGIDK NGKPHKVRLY SIASSALGDL GNSETVSLCV KRLVYTNDQG ETVKGVCSNF LCDLAPGSDV
201: KLTGPVGKEM LMPKDPNATV IMLATGTGIA PFRSFLWKMF FEKHDDYKFN GLAWLFLGVP TTSSLLYQEE FDKMKAKAPE NFRVDYAISR EQANDKGEKM
301: YIQTRMAQYA AELWELLKKD NTFVYMCGLK GMEKGIDDIM VSLAANDGID WFDYKKQLKK AEQWNVEVY
101: TKITADDAPG ETWHMVFSHQ GEIPYREGQS VGVIADGIDK NGKPHKVRLY SIASSALGDL GNSETVSLCV KRLVYTNDQG ETVKGVCSNF LCDLAPGSDV
201: KLTGPVGKEM LMPKDPNATV IMLATGTGIA PFRSFLWKMF FEKHDDYKFN GLAWLFLGVP TTSSLLYQEE FDKMKAKAPE NFRVDYAISR EQANDKGEKM
301: YIQTRMAQYA AELWELLKKD NTFVYMCGLK GMEKGIDDIM VSLAANDGID WFDYKKQLKK AEQWNVEVY
Arabidopsis Description
LFNR2Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W493]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.