CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02299	Canola	plastid	97.12	97.12
AT1G30510.2	Thale cress	plastid	93.19	93.19
Bra032396.1-P	Field mustard	peroxisome, plastid, vacuole	96.34	88.04
KRH11782	Soybean	nucleus, plastid	79.58	80.64
KRH36793	Soybean	plastid	78.01	79.05
VIT_10s0003g04880.t01	Wine grape	plastid	77.49	78.51
GSMUA_Achr4P28350_001	Banana	plastid	76.44	78.28
PGSC0003DMT400010484	Potato	plastid	76.44	78.07
PGSC0003DMT400030830	Potato	extracellular, plastid	75.92	77.54
CDY46362	Canola	plastid	76.7	77.51
Solyc02g024050.2.1	Tomato	extracellular	75.39	77.01
CDY39167	Canola	plastid	75.92	76.72
GSMUA_Achr4P31670_001	Banana	plastid	76.44	76.64
Os07t0147900-01	Rice	plastid	74.87	75.66
EER90782	Sorghum	plastid	75.13	75.53
OQU88435	Sorghum	plastid	74.61	74.8
Os03t0784700-01	Rice	plastid	72.51	73.28
TraesCS2A01G252800.1	Wheat	plastid	72.25	73.21
TraesCS5B01G424900.1	Wheat	plastid	71.47	73.19
TraesCS5D01G431300.1	Wheat	plastid	71.99	73.14
TraesCS5A01G423000.1	Wheat	plastid	71.73	72.87
TraesCS2D01G253400.1	Wheat	golgi	71.99	72.75
Zm00001d034345_P001	Maize	plastid	74.35	72.45
CDY51794	Canola	plastid	45.29	71.49
HORVU5Hr1G103180.1	Barley	plastid	71.47	70.73
Zm00001d018794_P003	Maize	plastid	74.08	70.05
HORVU2Hr1G038830.1	Barley	plastid	73.04	64.88
TraesCS2B01G272500.1	Wheat	plastid	34.55	60.0
CDY18592	Canola	plastid	43.46	45.86
CDX81408	Canola	plastid	43.46	45.73
CDY40011	Canola	cytosol, mitochondrion, peroxisome	27.49	44.68
CDY20886	Canola	mitochondrion, plastid	25.13	44.44
CDY57601	Canola	plastid	40.84	42.51
CDX83730	Canola	plastid	40.31	40.85
CDY43420	Canola	plastid	38.74	40.66
CDY62940	Canola	plastid	39.27	40.43
CDY55097	Canola	vacuole	38.48	38.79
CDY23149	Canola	endoplasmic reticulum, plastid	11.78	26.95
CDX83820	Canola	endoplasmic reticulum, plasma membrane	12.04	26.59
CDY57760	Canola	plastid	43.19	16.43

Protein Annotations

KEGG:00195+1.18.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.17	GO:A0A078F572	UniProt:A0A078F572
EnsemblPlants:CDY09570	ProteinID:CDY09570	ProteinID:CDY09570.1	InterPro:FNR	InterPro:FNR_plant_Cyanobacteria	InterPro:Fd_Rdtase_FAD-bd
InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004324	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00031184001	InterPro:IPR017927	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175
PIRSF:PIRSF000361	PIRSF:PIRSF501178	PRINTS:PR00371	PFscan:PS51384	PANTHER:PTHR43314	PANTHER:PTHR43314:SF6
MetaCyc:PWY-101	MetaCyc:PWY-7230	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	UniParc:UPI0004EEAD30
SEG:seg	:	:	:	:	:

Description

BnaC05g23490DFerredoxin--NADP reductase [Source:UniProtKB/TrEMBL;Acc:A0A078F572]

Coordinates

chrLK031997:+:571807..573713

Molecular Weight (calculated)

42657.5 Da

IEP (calculated)

8.508

GRAVY (calculated)

-0.576

Length

382 amino acids

Sequence
(BLAST)

001: MSHSAVSQAA AVSVSIGNER SLTRSVFKHN NSISFNTKPW SSSLALTQKT STIRDAKRYS NTTICMSVQQ ASSSKVNVSP IELEDPTDPP LNLYKPKDSY
101: TAKIVSVERV VGPKAPGETC HIVIDHEGNL PYWEGQSYGV IPPGENPKKP GAPHNVRLYS IASTRYGDFF DGKTASLCVR RAVYYDPETG KEDPSKNGVC
201: SNFLCDSKPG DKIQITGPSG KVMLLPENDP NATHIMIATG TGVAPYRGYL RRLFMENVPN YKFGGLAWLF LGVANTDSLL YDDEFSKYLK DHPDNFRFDK
301: ALSREEKNKK GGKMYVQDKI EEYSDEIFKL LDNGAHIYFC GLKGMMPGIQ DTLKRVAEER GESWDAKLSQ LRKNKQWHVE VY

Best Arabidopsis Sequence Match ( AT1G30510.2 )
(BLAST)

001: MSHSAVSQAG AVSVSIENQR SLRRSVFKQN NSISFNSKSW SSSLALNQKT TSIRDGKRYP STTICMSVQQ TSSSKVTVSP IELEDPKDPP LNLYKPKESY
101: TAKIVSVERV VGPKAPGETC HIVIDHDGNL PYWEGQSYGV IPPGENPKKP GAPHNVRLYS IASTRYGDFF DGKTASLCVR RAVYYDPETG KEDPSKNGVC
201: SNFLCDSKPG DKIQITGPSG KVMLLPESDP NATHIMIATG TGVAPYRGYL RRMFMENVPN KTFSGLAWLF LGVANTDSLL YDEEFTKYLK DHPDNFRFDK
301: ALSREEKNKK GGKMYVQDKI EEYSDEIFKL LDNGAHIYFC GLKGMMPGIQ DTLKRVAEER GESWDLKLSQ LRKNKQWHVE VY

Arabidopsis Description

RFNR2Ferredoxin--NADP reductase, root isozyme 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S9P8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.