Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5D01G431300.1 | Wheat | plastid | 96.78 | 96.01 |
TraesCS5A01G423000.1 | Wheat | plastid | 95.71 | 94.95 |
HORVU5Hr1G103180.1 | Barley | plastid | 92.23 | 89.12 |
Os03t0784700-01 | Rice | plastid | 85.52 | 84.39 |
EER90782 | Sorghum | plastid | 82.57 | 81.05 |
Zm00001d034345_P001 | Maize | plastid | 81.77 | 77.81 |
KRH11782 | Soybean | nucleus, plastid | 76.14 | 75.33 |
VIT_10s0003g04880.t01 | Wine grape | plastid | 75.07 | 74.27 |
GSMUA_Achr4P28350_001 | Banana | plastid | 74.26 | 74.26 |
KRH36793 | Soybean | plastid | 74.53 | 73.74 |
PGSC0003DMT400010484 | Potato | plastid | 73.46 | 73.26 |
PGSC0003DMT400030830 | Potato | extracellular, plastid | 73.19 | 72.99 |
GSMUA_Achr4P31670_001 | Banana | plastid | 74.53 | 72.97 |
Solyc02g024050.2.1 | Tomato | extracellular | 72.65 | 72.46 |
AT1G30510.2 | Thale cress | plastid | 73.99 | 72.25 |
CDY39167 | Canola | plastid | 73.19 | 72.22 |
CDY46362 | Canola | plastid | 72.92 | 71.96 |
Bra029574.1-P | Field mustard | plastid | 72.92 | 71.96 |
AT4G05390.1 | Thale cress | plastid | 72.65 | 71.69 |
CDY09570 | Canola | plastid | 73.19 | 71.47 |
CDY02299 | Canola | plastid | 72.92 | 71.2 |
Bra032396.1-P | Field mustard | peroxisome, plastid, vacuole | 72.65 | 64.83 |
CDY51794 | Canola | plastid | 39.95 | 61.57 |
TraesCS2B01G272500.1 | Wheat | plastid | 33.24 | 56.36 |
TraesCS6B01G015000.1 | Wheat | plastid | 39.68 | 40.77 |
CDY40011 | Canola | cytosol, mitochondrion, peroxisome | 23.32 | 37.02 |
CDY20886 | Canola | mitochondrion, plastid | 21.18 | 36.57 |
Protein Annotations
KEGG:00195+1.18.1.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | MapMan:50.1.17 | ncoils:Coil | InterPro:FNR |
InterPro:FNR_plant_Cyanobacteria | InterPro:Fd_Rdtase_FAD-bd | InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR017927 | InterPro:OxRdtase_FAD/NAD-bd | PFAM:PF00175 |
PIRSF:PIRSF000361 | PIRSF:PIRSF501178 | PRINTS:PR00371 | PFscan:PS51384 | PANTHER:PTHR43314 | PANTHER:PTHR43314:SF4 |
InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 | SUPFAM:SSF63380 | EnsemblPlantsGene:TraesCS5B01G424900 | EnsemblPlants:TraesCS5B01G424900.1 | TIGR:cd06208 |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:600930274..600933420
Molecular Weight (calculated)
40882.4 Da
IEP (calculated)
8.591
GRAVY (calculated)
-0.493
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAAASQVA FSAPSDRAVS GSGIQGINSL SFGTKSWIGT ALACDSKAAA QPRHVCRAVQ QSSKSKVSVA PLDLESAKEP PLNTYKPKGP YTATIVSVER
101: AVGPNAPGET CHVVIDHGGN VPYWEGQSYG IIPPGENPKK PGNPQNVRLY SIASTRYGDS FDGKTASLCV RRAVYYDPET GKEDPSKNGV CSNFLCNSKP
201: GDKIQMTGPS GKIMLLPETD PNATHIMIAT GTGVAPYRGY LRRMFMEDVP NFRFGGLAWL FLGVANSDSL LYDEEFTSYL KQYPDNFRFD KALSREQKNK
301: SGSKMYVQDK IEEYSDEIFK LLDGGAHIYF CGLKGMMPGI QDTLKKVAEQ RGESWDQKLS QLKKNKQWHV EVY
101: AVGPNAPGET CHVVIDHGGN VPYWEGQSYG IIPPGENPKK PGNPQNVRLY SIASTRYGDS FDGKTASLCV RRAVYYDPET GKEDPSKNGV CSNFLCNSKP
201: GDKIQMTGPS GKIMLLPETD PNATHIMIAT GTGVAPYRGY LRRMFMEDVP NFRFGGLAWL FLGVANSDSL LYDEEFTSYL KQYPDNFRFD KALSREQKNK
301: SGSKMYVQDK IEEYSDEIFK LLDGGAHIYF CGLKGMMPGI QDTLKKVAEQ RGESWDQKLS QLKKNKQWHV EVY
001: MALSTTPSQM SVALPTRIDG SSRSMIKVQS ISFTDKSWGP PLLRLDSKSR SLGVKKRSTI CMSLQQSSKS KVLVTPLELE DPKETPLNLF RPKEPYTATI
101: VSVERIVGPQ APGETCHIVI DHDGNVPYWE GQSYGVIPPG ENPKKPGAPH NVRLYSIAST RYGDSFDGKT ASLCVRRAIY YDPETGKEDP SKAGVCSNFL
201: CNAKPGDKVK ITGPSGKVML LPEDDPKATH IMIATGTGVA PYRGYLRRMF MENVPNFKFD GLAWLFLGVA NSDSLLYDEE FAGYRKDYPE NFRYDKALSR
301: EEKNKKGGKM YVQDKIEEYS DEIFKLLDNG AHIYFCGLKG MMPGIQDTLK RVAEERGESW EQKLTQLRKN KQWHVEVY
101: VSVERIVGPQ APGETCHIVI DHDGNVPYWE GQSYGVIPPG ENPKKPGAPH NVRLYSIAST RYGDSFDGKT ASLCVRRAIY YDPETGKEDP SKAGVCSNFL
201: CNAKPGDKVK ITGPSGKVML LPEDDPKATH IMIATGTGVA PYRGYLRRMF MENVPNFKFD GLAWLFLGVA NSDSLLYDEE FAGYRKDYPE NFRYDKALSR
301: EEKNKKGGKM YVQDKIEEYS DEIFKLLDNG AHIYFCGLKG MMPGIQDTLK RVAEERGESW EQKLTQLRKN KQWHVEVY
Arabidopsis Description
RFNR1Ferredoxin--NADP reductase, root isozyme 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0V6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.