Factsheet for TraesCS2B01G272500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G253400.1	Wheat	golgi	95.0	55.29
TraesCS2A01G252800.1	Wheat	plastid	93.64	54.64
Os07t0147900-01	Rice	plastid	72.27	42.06
OQU88435	Sorghum	plastid	72.73	41.99
HORVU2Hr1G038830.1	Barley	plastid	81.36	41.63
KRH11782	Soybean	nucleus, plastid	65.45	38.2
KRH36793	Soybean	plastid	65.0	37.93
Zm00001d018794_P003	Maize	plastid	67.73	36.88
VIT_10s0003g04880.t01	Wine grape	plastid	62.73	36.6
GSMUA_Achr4P28350_001	Banana	plastid	60.91	35.92
PGSC0003DMT400010484	Potato	plastid	60.45	35.56
PGSC0003DMT400030830	Potato	extracellular, plastid	60.0	35.29
AT1G30510.2	Thale cress	plastid	60.91	35.08
Solyc02g024050.2.1	Tomato	extracellular	59.55	35.03
GSMUA_Achr4P31670_001	Banana	plastid	60.45	34.91
CDY09570	Canola	plastid	60.0	34.55
CDY46362	Canola	plastid	59.09	34.39
Bra029574.1-P	Field mustard	plastid	59.09	34.39
CDY02299	Canola	plastid	59.55	34.29
CDY39167	Canola	plastid	58.64	34.13
AT4G05390.1	Thale cress	plastid	58.64	34.13
TraesCS5B01G424900.1	Wheat	plastid	56.36	33.24
Bra032396.1-P	Field mustard	peroxisome, plastid, vacuole	60.0	31.58
CDY40011	Canola	cytosol, mitochondrion, peroxisome	31.36	29.36
CDY20886	Canola	mitochondrion, plastid	28.18	28.7
CDY51794	Canola	plastid	30.0	27.27
TraesCS6B01G015000.1	Wheat	plastid	31.36	19.01

Protein Annotations

EnsemblPlants:TraesCS2B01G272500.1	EnsemblPlantsGene:TraesCS2B01G272500	Gene3D:2.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	InterPro:IPR017927
InterPro:Riboflavin_synthase-like_b-brl	PANTHER:PTHR43314	PANTHER:PTHR43314:SF4	PFscan:PS51384	PRINTS:PR00371	SEG:seg
SUPFAM:SSF63380	MapMan:50.1.17	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:373981052..373983665

Molecular Weight (calculated)

23869.6 Da

IEP (calculated)

9.514

GRAVY (calculated)

-0.553

Length

220 amino acids

Sequence
(BLAST)

001: MASALGAQVA AVAPIGSDGR HYRSCSSLKG NNSCNKSWTG KLAWENKTLQ PRHTKKVFCM SVQQASKSKC KVAIKPLELE NTKEPPLNLY KPKGPYTASI
101: VSVERIVGPK TPGETCHFVI DHGGNVPYWE GQSYGVIPPG ENPKKPGAPN TVRLYSIAST RYGDSFDGRT ASLCVCRAVY YDPETGKEDP SKKGICSNFL
201: CDSKLGDKIQ ITGMQPCKKP

Best Arabidopsis Sequence Match ( AT1G30510.1 )
(BLAST)

001: MSHSAVSQAG AVSVSIENQR SLRRSVFKNN SISFNSKSWS SSLALNQKTT SIRDGKRYPS TTICMSVQQT SSSKVTVSPI ELEDPKDPPL NLYKPKESYT
101: AKIVSVERVV GPKAPGETCH IVIDHDGNLP YWEGQSYGVI PPGENPKKPG APHNVRLYSI ASTRYGDFFD GKTASLCVRR AVYYDPETGK EDPSKNGVCS
201: NFLCDSKPGD KIQITGPSGK VMLLPESDPN ATHIMIATGT GVAPYRGYLR RMFMENVPNK TFSGLAWLFL GVANTDSLLY DEEFTKYLKD HPDNFRFDKA
301: LSREEKNKKG GKMYVQDKIE EYSDEIFKLL DNGAHIYFCG LKGMMPGIQD TLKRVAEERG ESWDLKLSQL RKNKQWHVEV Y

Arabidopsis Description

RFNR2Ferredoxin--NADP reductase, root isozyme 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S9P8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.