Factsheet for HORVU2Hr1G038830.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G253400.1	Wheat	golgi	79.3	90.21
TraesCS2A01G252800.1	Wheat	plastid	79.07	90.19
Os07t0147900-01	Rice	plastid	74.65	84.92
OQU88435	Sorghum	plastid	74.42	83.99
TraesCS2B01G272500.1	Wheat	plastid	41.63	81.36
KRH11782	Soybean	nucleus, plastid	68.6	78.25
Zm00001d018794_P003	Maize	plastid	73.26	77.97
KRH36793	Soybean	plastid	67.91	77.45
GSMUA_Achr4P28350_001	Banana	plastid	66.98	77.21
PGSC0003DMT400010484	Potato	plastid	66.28	76.2
Solyc02g024050.2.1	Tomato	extracellular	66.05	75.94
PGSC0003DMT400030830	Potato	extracellular, plastid	65.81	75.67
VIT_10s0003g04880.t01	Wine grape	plastid	66.28	75.6
HORVU5Hr1G103180.1	Barley	plastid	67.21	74.87
GSMUA_Achr4P31670_001	Banana	plastid	66.28	74.8
CDY39167	Canola	plastid	65.58	74.6
CDY46362	Canola	plastid	65.58	74.6
Bra029574.1-P	Field mustard	plastid	65.58	74.6
AT4G05390.1	Thale cress	plastid	64.88	73.81
AT1G30510.2	Thale cress	plastid	65.35	73.56
CDY09570	Canola	plastid	64.88	73.04
CDY02299	Canola	plastid	64.42	72.51
Bra032396.1-P	Field mustard	peroxisome, plastid, vacuole	64.19	66.03
CDY51794	Canola	plastid	35.12	62.4
HORVU7Hr1G002210.8	Barley	plastid	33.02	39.44
CDY20886	Canola	mitochondrion, plastid	18.84	37.5
CDY40011	Canola	cytosol, mitochondrion, peroxisome	20.47	37.45
HORVU6Hr1G000620.2	Barley	plastid	34.65	37.25

Protein Annotations

KEGG:00195+1.18.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.17	UniProt:A0A287HRT6	InterPro:FNR
InterPro:FNR_plant_Cyanobacteria	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004324
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G038830	EnsemblPlants:HORVU2Hr1G038830.1
InterPro:IPR017927	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PIRSF:PIRSF000361	PIRSF:PIRSF501178	PRINTS:PR00371
PFscan:PS51384	PANTHER:PTHR43314	PANTHER:PTHR43314:SF6	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380
UniParc:UPI000B46B0EA	SEG:seg	:	:	:	:

Description

Ferredoxin--NADP reductase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A287HRT6]

Coordinates

chrchr2H:+:184566813..184570474

Molecular Weight (calculated)

47790.0 Da

IEP (calculated)

9.466

GRAVY (calculated)

-0.575

Length

430 amino acids

Sequence
(BLAST)

001: PCGTEQSCHS PDSGLCFSTL LQTSTPVSLS FLPRRFRRSK FKTLANSRHR SAMASALGAQ VAAVVPIGPD GRHYRSCSSL KGNNSCNKSW TGKLAWGNKT
101: LQPRYTKKVF CMSVQQASKS KGKVGIKPLE LENTKEPPLN LYKPKGPYTA SIVSVERIVG PKAPGETCHI VIDHGGNVPY WEGQSYGVIP PGENPKKPGS
201: PNTVRLYSIA STRYGDSFDG RTASLCVRRA VYYDPETGKE DPSKKGICSN FLCDSKPGDK IQITGPSGKI MLLPEDDPNT THIMIGTGTG VAPFRGYLRR
301: MFMEDVPSFK FGGLAWLFLG VANTDSLLYD EEFTNYLQQY PENFRYDKAL SREQNNKSGG KMYVQDKIEE YSDEIFKLLD GGAHIYFCGL KGMMPGIQDT
401: LKRVAEQRGE SWDQKLSQLK KNKQWHVEVY

Best Arabidopsis Sequence Match ( AT1G30510.1 )
(BLAST)

001: MSHSAVSQAG AVSVSIENQR SLRRSVFKNN SISFNSKSWS SSLALNQKTT SIRDGKRYPS TTICMSVQQT SSSKVTVSPI ELEDPKDPPL NLYKPKESYT
101: AKIVSVERVV GPKAPGETCH IVIDHDGNLP YWEGQSYGVI PPGENPKKPG APHNVRLYSI ASTRYGDFFD GKTASLCVRR AVYYDPETGK EDPSKNGVCS
201: NFLCDSKPGD KIQITGPSGK VMLLPESDPN ATHIMIATGT GVAPYRGYLR RMFMENVPNK TFSGLAWLFL GVANTDSLLY DEEFTKYLKD HPDNFRFDKA
301: LSREEKNKKG GKMYVQDKIE EYSDEIFKLL DNGAHIYFCG LKGMMPGIQD TLKRVAEERG ESWDLKLSQL RKNKQWHVEV Y

Arabidopsis Description

RFNR2Ferredoxin--NADP reductase, root isozyme 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S9P8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.