Factsheet for HORVU5Hr1G103180.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G423000.1	Wheat	plastid	90.67	93.09
TraesCS5D01G431300.1	Wheat	plastid	90.41	92.82
TraesCS5B01G424900.1	Wheat	plastid	89.12	92.23
Os03t0784700-01	Rice	plastid	80.57	82.28
EER90782	Sorghum	plastid	79.79	81.05
Zm00001d034345_P001	Maize	plastid	78.5	77.3
GSMUA_Achr4P28350_001	Banana	plastid	73.32	75.87
KRH11782	Soybean	nucleus, plastid	73.32	75.07
GSMUA_Achr4P31670_001	Banana	plastid	73.83	74.8
KRH36793	Soybean	plastid	71.76	73.47
PGSC0003DMT400010484	Potato	plastid	70.98	73.26
VIT_10s0003g04880.t01	Wine grape	plastid	71.5	73.21
Solyc02g024050.2.1	Tomato	extracellular	70.73	72.99
PGSC0003DMT400030830	Potato	extracellular, plastid	70.73	72.99
AT1G30510.2	Thale cress	plastid	72.02	72.77
CDY09570	Canola	plastid	70.73	71.47
CDY39167	Canola	plastid	69.95	71.43
Bra029574.1-P	Field mustard	plastid	69.95	71.43
CDY46362	Canola	plastid	69.95	71.43
AT4G05390.1	Thale cress	plastid	69.69	71.16
CDY02299	Canola	plastid	69.95	70.68
HORVU2Hr1G038830.1	Barley	plastid	74.87	67.21
Bra032396.1-P	Field mustard	peroxisome, plastid, vacuole	69.69	64.35
CDY51794	Canola	plastid	39.12	62.4
HORVU7Hr1G002210.8	Barley	plastid	35.75	38.33
CDY40011	Canola	cytosol, mitochondrion, peroxisome	22.02	36.17
HORVU6Hr1G000620.2	Barley	plastid	37.31	36.0
CDY20886	Canola	mitochondrion, plastid	19.69	35.19

Protein Annotations

KEGG:00195+1.18.1.2	Gene3D:2.40.30.10	Gene3D:3.40.50.80	MapMan:50.1.17	UniProt:A0A287SJ10	ncoils:Coil
InterPro:FNR	InterPro:FNR_plant_Cyanobacteria	InterPro:Fd_Rdtase_FAD-bd	InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase	GO:GO:0003674	GO:GO:0003824
GO:GO:0004324	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G103180
EnsemblPlants:HORVU5Hr1G103180.1	InterPro:IPR017927	InterPro:OxRdtase_FAD/NAD-bd	PFAM:PF00175	PIRSF:PIRSF000361	PIRSF:PIRSF501178
PRINTS:PR00371	PFscan:PS51384	PANTHER:PTHR43314	PANTHER:PTHR43314:SF4	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343
SUPFAM:SSF63380	UniParc:UPI000B4680B1	SEG:seg	:	:	:

Description

Ferredoxin--NADP reductase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A287SJ10]

Coordinates

chrchr5H:-:615129596..615132665

Molecular Weight (calculated)

42327.2 Da

IEP (calculated)

9.154

GRAVY (calculated)

-0.516

Length

386 amino acids

Sequence
(BLAST)

001: LPRTIRPSAM ATAAASQQVA FSAPVAGSDR AVRSSGIKGT NSLSFGNKSW IGTALACDGK AALQQRHVCR AVQQSSKSKV SVAPLDLESA KEPPLNTYKP
101: KGPYTATIVS VERAVGPNAP GETCHVVIDH GGNVPYWEGQ SYGIIPPGEN PKKPGNPQNV RLYSIASTRY GDSFDGKTAS LCVRRAVYYD PETGKEDPSK
201: NGVCSNFLCN SKPGDKIQLT GPSGKIMLLP ESDPNATHIM IATGTGVAPY RGYLRRMFME DVPNYRFGGL AWLFLGVANS DSLLYDEEFT SYLKQYPDNF
301: RFDKALSREQ KNKSGGKMYV QDKIEEYSDE IFKLLDGGAH IYFCGLKGMM PGIQDTLKKV AEQRGESWDQ KLSQLKKNKQ WHVEVY

Best Arabidopsis Sequence Match ( AT1G30510.2 )
(BLAST)

001: MSHSAVSQAG AVSVSIENQR SLRRSVFKQN NSISFNSKSW SSSLALNQKT TSIRDGKRYP STTICMSVQQ TSSSKVTVSP IELEDPKDPP LNLYKPKESY
101: TAKIVSVERV VGPKAPGETC HIVIDHDGNL PYWEGQSYGV IPPGENPKKP GAPHNVRLYS IASTRYGDFF DGKTASLCVR RAVYYDPETG KEDPSKNGVC
201: SNFLCDSKPG DKIQITGPSG KVMLLPESDP NATHIMIATG TGVAPYRGYL RRMFMENVPN KTFSGLAWLF LGVANTDSLL YDEEFTKYLK DHPDNFRFDK
301: ALSREEKNKK GGKMYVQDKI EEYSDEIFKL LDNGAHIYFC GLKGMMPGIQ DTLKRVAEER GESWDLKLSQ LRKNKQWHVE VY

Arabidopsis Description

RFNR2Ferredoxin--NADP reductase, root isozyme 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S9P8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.