Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46362 | Canola | plastid | 92.06 | 92.06 |
| Bra029574.1-P | Field mustard | plastid | 91.53 | 91.53 |
| CDY39167 | Canola | plastid | 90.74 | 90.74 |
| Solyc02g024050.2.1 | Tomato | extracellular | 77.78 | 78.61 |
| PGSC0003DMT400010484 | Potato | plastid | 77.51 | 78.34 |
| AT1G30510.2 | Thale cress | plastid | 79.1 | 78.27 |
| PGSC0003DMT400030830 | Potato | extracellular, plastid | 77.25 | 78.07 |
| KRH11782 | Soybean | nucleus, plastid | 77.51 | 77.72 |
| KRH36793 | Soybean | plastid | 76.72 | 76.92 |
| Os07t0147900-01 | Rice | plastid | 76.19 | 76.19 |
| VIT_10s0003g04880.t01 | Wine grape | plastid | 75.93 | 76.13 |
| GSMUA_Achr4P28350_001 | Banana | plastid | 74.07 | 75.07 |
| EER90782 | Sorghum | plastid | 75.13 | 74.74 |
| GSMUA_Achr4P31670_001 | Banana | plastid | 75.13 | 74.54 |
| OQU88435 | Sorghum | plastid | 74.6 | 74.02 |
| TraesCS2A01G252800.1 | Wheat | plastid | 72.75 | 72.94 |
| TraesCS5A01G423000.1 | Wheat | plastid | 72.49 | 72.87 |
| TraesCS2D01G253400.1 | Wheat | golgi | 72.75 | 72.75 |
| TraesCS5B01G424900.1 | Wheat | plastid | 71.69 | 72.65 |
| TraesCS5D01G431300.1 | Wheat | plastid | 72.22 | 72.61 |
| Os03t0784700-01 | Rice | plastid | 72.49 | 72.49 |
| Zm00001d034345_P001 | Maize | plastid | 74.6 | 71.94 |
| HORVU5Hr1G103180.1 | Barley | plastid | 71.16 | 69.69 |
| Zm00001d018794_P003 | Maize | plastid | 73.55 | 68.81 |
| HORVU2Hr1G038830.1 | Barley | plastid | 73.81 | 64.88 |
| TraesCS2B01G272500.1 | Wheat | plastid | 34.13 | 58.64 |
| AT5G66190.1 | Thale cress | plastid | 43.12 | 45.28 |
| AT1G20020.1 | Thale cress | plastid | 41.8 | 42.82 |
Protein Annotations
| KEGG:00195+1.18.1.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | MapMan:50.1.17 | EntrezGene:825887 | ProteinID:AEE82512.1 |
| ProteinID:AEE82513.1 | ArrayExpress:AT4G05390 | EnsemblPlantsGene:AT4G05390 | RefSeq:AT4G05390 | TAIR:AT4G05390 | RefSeq:AT4G05390-TAIR-G |
| EnsemblPlants:AT4G05390.1 | TAIR:AT4G05390.1 | Symbol:ATRFNR1 | EMBL:AY072339 | EMBL:AY087271 | EMBL:AY114609 |
| EMBL:AY136312 | Unigene:At.33854 | ProteinID:CAB81081.1 | ncoils:Coil | InterPro:FNR | InterPro:FNR_plant_Cyanobacteria |
| InterPro:Fd_Rdtase_FAD-bd | InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004324 | GO:GO:0005488 |
| GO:GO:0005507 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:IPR017927 | RefSeq:NP_001190682.1 | RefSeq:NP_567293.1 | InterPro:OxRdtase_FAD/NAD-bd | PFAM:PF00175 |
| PIRSF:PIRSF000361 | PIRSF:PIRSF501178 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00371 | PFscan:PS51384 | PANTHER:PTHR43314 | PANTHER:PTHR43314:SF6 |
| UniProt:Q9M0V6 | Symbol:RFNR1 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 | SUPFAM:SSF63380 | UniParc:UPI00000A334D |
Description
RFNR1Ferredoxin--NADP reductase, root isozyme 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M0V6]
Coordinates
chr4:-:2738626..2740927
Molecular Weight (calculated)
42398.7 Da
IEP (calculated)
8.844
GRAVY (calculated)
-0.558
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSTTPSQM SVALPTRIDG SSRSMIKVQS ISFTDKSWGP PLLRLDSKSR SLGVKKRSTI CMSLQQSSKS KVLVTPLELE DPKETPLNLF RPKEPYTATI
101: VSVERIVGPQ APGETCHIVI DHDGNVPYWE GQSYGVIPPG ENPKKPGAPH NVRLYSIAST RYGDSFDGKT ASLCVRRAIY YDPETGKEDP SKAGVCSNFL
201: CNAKPGDKVK ITGPSGKVML LPEDDPKATH IMIATGTGVA PYRGYLRRMF MENVPNFKFD GLAWLFLGVA NSDSLLYDEE FAGYRKDYPE NFRYDKALSR
301: EEKNKKGGKM YVQDKIEEYS DEIFKLLDNG AHIYFCGLKG MMPGIQDTLK RVAEERGESW EQKLTQLRKN KQWHVEVY
101: VSVERIVGPQ APGETCHIVI DHDGNVPYWE GQSYGVIPPG ENPKKPGAPH NVRLYSIAST RYGDSFDGKT ASLCVRRAIY YDPETGKEDP SKAGVCSNFL
201: CNAKPGDKVK ITGPSGKVML LPEDDPKATH IMIATGTGVA PYRGYLRRMF MENVPNFKFD GLAWLFLGVA NSDSLLYDEE FAGYRKDYPE NFRYDKALSR
301: EEKNKKGGKM YVQDKIEEYS DEIFKLLDNG AHIYFCGLKG MMPGIQDTLK RVAEERGESW EQKLTQLRKN KQWHVEVY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.