Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P28350_001 | Banana | plastid | 88.71 | 90.62 |
| KRH36793 | Soybean | plastid | 79.0 | 79.84 |
| KRH11782 | Soybean | nucleus, plastid | 79.0 | 79.84 |
| EER90782 | Sorghum | plastid | 79.0 | 79.21 |
| Os07t0147900-01 | Rice | plastid | 78.22 | 78.84 |
| PGSC0003DMT400010484 | Potato | plastid | 76.9 | 78.34 |
| VIT_10s0003g04880.t01 | Wine grape | plastid | 76.64 | 77.45 |
| AT1G30510.2 | Thale cress | plastid | 77.43 | 77.23 |
| OQU88435 | Sorghum | plastid | 77.17 | 77.17 |
| Solyc02g024050.2.1 | Tomato | extracellular | 75.59 | 77.01 |
| PGSC0003DMT400030830 | Potato | extracellular, plastid | 75.33 | 76.74 |
| CDY09570 | Canola | plastid | 76.64 | 76.44 |
| Os03t0784700-01 | Rice | plastid | 75.59 | 76.19 |
| Zm00001d034345_P001 | Maize | plastid | 78.22 | 76.02 |
| CDY02299 | Canola | plastid | 75.59 | 75.39 |
| AT4G05390.1 | Thale cress | plastid | 74.54 | 75.13 |
| Bra029574.1-P | Field mustard | plastid | 74.54 | 75.13 |
| CDY46362 | Canola | plastid | 74.54 | 75.13 |
| CDY39167 | Canola | plastid | 74.54 | 75.13 |
| TraesCS2A01G252800.1 | Wheat | plastid | 74.28 | 75.07 |
| TraesCS5D01G431300.1 | Wheat | plastid | 74.02 | 75.0 |
| TraesCS2D01G253400.1 | Wheat | golgi | 74.28 | 74.87 |
| TraesCS5A01G423000.1 | Wheat | plastid | 73.75 | 74.73 |
| TraesCS5B01G424900.1 | Wheat | plastid | 72.97 | 74.53 |
| HORVU5Hr1G103180.1 | Barley | plastid | 74.8 | 73.83 |
| Zm00001d018794_P003 | Maize | plastid | 75.85 | 71.53 |
| Bra032396.1-P | Field mustard | peroxisome, plastid, vacuole | 75.33 | 68.66 |
| HORVU2Hr1G038830.1 | Barley | plastid | 74.8 | 66.28 |
| CDY51794 | Canola | plastid | 41.99 | 66.12 |
| TraesCS2B01G272500.1 | Wheat | plastid | 34.91 | 60.45 |
| GSMUA_Achr11P... | Banana | plastid | 42.78 | 45.53 |
| GSMUA_Achr1P02830_001 | Banana | plastid | 41.47 | 43.89 |
| CDY40011 | Canola | cytosol, mitochondrion, peroxisome | 25.46 | 41.28 |
| CDY20886 | Canola | mitochondrion, plastid | 23.1 | 40.74 |
| GSMUA_Achr8P13460_001 | Banana | plastid | 42.26 | 38.15 |
Protein Annotations
| KEGG:00195+1.18.1.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | MapMan:50.1.17 | InterPro:FNR | InterPro:FNR_plant_Cyanobacteria |
| InterPro:Fd_Rdtase_FAD-bd | InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004324 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr4G31670_001 | EnsemblPlants:GSMUA_Achr4P31670_001 | EnsemblPlants:GSMUA_Achr4T31670_001 |
| InterPro:IPR017927 | UniProt:M0STS9 | InterPro:OxRdtase_FAD/NAD-bd | PFAM:PF00175 | PIRSF:PIRSF000361 | PIRSF:PIRSF501178 |
| PRINTS:PR00371 | PFscan:PS51384 | PANTHER:PTHR43314 | PANTHER:PTHR43314:SF6 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 |
| SUPFAM:SSF63380 | UniParc:UPI000295013D | SEG:seg | : | : | : |
Description
Ferredoxin--NADP reductase, root isozyme, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G31670_001]
Coordinates
chr4:+:28779674..28784029
Molecular Weight (calculated)
42473.6 Da
IEP (calculated)
8.305
GRAVY (calculated)
-0.470
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIYGLSVRQ ASVSPSVAAD ASLRKAGFKI NNNLSYDNKL WIPLSSVNLK SRFSSTKFQC KVVSMSVQQT VQSKIPVQPL ELENAKEPPL NLYKPKEPYT
101: ATIVSVERLV GPNAPGETCH IVIDHGGNVP YWEGQSYGVI PPGENPKKPG NPHNVRLYSI ASTRYGDSFD GKTASLCVRR AVYYDAETGK EDPSKNGVCS
201: NFLCDSKPGD KILLTGPSGK IMLLPEEDPN ATHIMIATGT GVAPFRGYLR RMFMEAVATY KFGGLAWLFL GVANSDSLLY DDEFTGYLKD YPDNFRYDKA
301: LSREQKNKNG GKMYVQDKIE EYSDEIFKLL DGGAHIYFCG LKGMMPGIQD TLKRVAEERG ESWDTKLSQL KKNKQWHVEV Y
101: ATIVSVERLV GPNAPGETCH IVIDHGGNVP YWEGQSYGVI PPGENPKKPG NPHNVRLYSI ASTRYGDSFD GKTASLCVRR AVYYDAETGK EDPSKNGVCS
201: NFLCDSKPGD KILLTGPSGK IMLLPEEDPN ATHIMIATGT GVAPFRGYLR RMFMEAVATY KFGGLAWLFL GVANSDSLLY DDEFTGYLKD YPDNFRYDKA
301: LSREQKNKNG GKMYVQDKIE EYSDEIFKLL DGGAHIYFCG LKGMMPGIQD TLKRVAEERG ESWDTKLSQL KKNKQWHVEV Y
001: MSHSAVSQAG AVSVSIENQR SLRRSVFKQN NSISFNSKSW SSSLALNQKT TSIRDGKRYP STTICMSVQQ TSSSKVTVSP IELEDPKDPP LNLYKPKESY
101: TAKIVSVERV VGPKAPGETC HIVIDHDGNL PYWEGQSYGV IPPGENPKKP GAPHNVRLYS IASTRYGDFF DGKTASLCVR RAVYYDPETG KEDPSKNGVC
201: SNFLCDSKPG DKIQITGPSG KVMLLPESDP NATHIMIATG TGVAPYRGYL RRMFMENVPN KTFSGLAWLF LGVANTDSLL YDEEFTKYLK DHPDNFRFDK
301: ALSREEKNKK GGKMYVQDKI EEYSDEIFKL LDNGAHIYFC GLKGMMPGIQ DTLKRVAEER GESWDLKLSQ LRKNKQWHVE VY
101: TAKIVSVERV VGPKAPGETC HIVIDHDGNL PYWEGQSYGV IPPGENPKKP GAPHNVRLYS IASTRYGDFF DGKTASLCVR RAVYYDPETG KEDPSKNGVC
201: SNFLCDSKPG DKIQITGPSG KVMLLPESDP NATHIMIATG TGVAPYRGYL RRMFMENVPN KTFSGLAWLF LGVANTDSLL YDEEFTKYLK DHPDNFRFDK
301: ALSREEKNKK GGKMYVQDKI EEYSDEIFKL LDNGAHIYFC GLKGMMPGIQ DTLKRVAEER GESWDLKLSQ LRKNKQWHVE VY
Arabidopsis Description
RFNR2Ferredoxin--NADP reductase, root isozyme 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S9P8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.