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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09570 Canola plastid 93.19 93.19
CDY02299 Canola plastid 91.62 91.62
Bra032396.1-P Field mustard peroxisome, plastid, vacuole 90.84 83.01
KRH11782 Soybean nucleus, plastid 78.53 79.58
AT4G05390.1 Thale cress plastid 78.27 79.1
PGSC0003DMT400010484 Potato plastid 77.23 78.88
VIT_10s0003g04880.t01 Wine grape plastid 77.75 78.78
KRH36793 Soybean plastid 77.75 78.78
PGSC0003DMT400030830 Potato extracellular, plastid 76.7 78.34
GSMUA_Achr4P28350_001 Banana plastid 75.65 77.48
GSMUA_Achr4P31670_001 Banana plastid 77.23 77.43
Solyc02g024050.2.1 Tomato extracellular 75.65 77.27
EER90782 Sorghum plastid 75.92 76.32
Os07t0147900-01 Rice plastid 75.39 76.19
OQU88435 Sorghum plastid 74.35 74.54
TraesCS5D01G431300.1 Wheat plastid 73.3 74.47
TraesCS5A01G423000.1 Wheat plastid 73.3 74.47
TraesCS2A01G252800.1 Wheat plastid 73.04 74.01
TraesCS5B01G424900.1 Wheat plastid 72.25 73.99
Zm00001d034345_P001 Maize plastid 75.92 73.98
TraesCS2D01G253400.1 Wheat golgi 72.77 73.55
Os03t0784700-01 Rice plastid 72.77 73.55
HORVU5Hr1G103180.1 Barley plastid 72.77 72.02
Zm00001d018794_P003 Maize plastid 73.82 69.8
HORVU2Hr1G038830.1 Barley plastid 73.56 65.35
TraesCS2B01G272500.1 Wheat plastid 35.08 60.91
AT5G66190.1 Thale cress plastid 42.93 45.56
AT1G20020.1 Thale cress plastid 40.84 42.28
Protein Annotations
KEGG:00195+1.18.1.2Gene3D:2.40.30.10Gene3D:3.40.50.80MapMan:50.1.17EntrezGene:839930ProteinID:AAF19753.1
ProteinID:AEE31235.1ProteinID:AEE31236.1ProteinID:AEE31237.1EMBL:AF424594ArrayExpress:AT1G30510EnsemblPlantsGene:AT1G30510
RefSeq:AT1G30510TAIR:AT1G30510RefSeq:AT1G30510-TAIR-GEnsemblPlants:AT1G30510.2TAIR:AT1G30510.2Symbol:ATRFNR2
EMBL:AY088018EMBL:AY140017Unigene:At.25172EMBL:BT008468InterPro:FNRInterPro:FNR_plant_Cyanobacteria
InterPro:Fd_Rdtase_FAD-bdInterPro:Flavoprot_Pyr_Nucl_cyt_RdtaseGO:GO:0003674GO:GO:0003824GO:GO:0004324GO:GO:0005488
GO:GO:0005507GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0009507GO:GO:0009536GO:GO:0009987GO:GO:0015979GO:GO:0016491
GO:GO:0055114InterPro:IPR017927RefSeq:NP_564355.1RefSeq:NP_849734.1RefSeq:NP_973942.1InterPro:OxRdtase_FAD/NAD-bd
PFAM:PF00175PIRSF:PIRSF000361PIRSF:PIRSF501178PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025281PRINTS:PR00371PFscan:PS51384PANTHER:PTHR43314
PANTHER:PTHR43314:SF6UniProt:Q9S9P8InterPro:Riboflavin_synthase-like_b-brlSUPFAM:SSF52343SUPFAM:SSF63380UniParc:UPI00000AA629
SEG:seg:::::
Description
RFNR2Ferredoxin--NADP reductase, root isozyme 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S9P8]
Coordinates
chr1:-:10806930..10809184
Molecular Weight (calculated)
42791.7 Da
IEP (calculated)
8.846
GRAVY (calculated)
-0.607
Length
382 amino acids
Sequence
(BLAST)
001: MSHSAVSQAG AVSVSIENQR SLRRSVFKQN NSISFNSKSW SSSLALNQKT TSIRDGKRYP STTICMSVQQ TSSSKVTVSP IELEDPKDPP LNLYKPKESY
101: TAKIVSVERV VGPKAPGETC HIVIDHDGNL PYWEGQSYGV IPPGENPKKP GAPHNVRLYS IASTRYGDFF DGKTASLCVR RAVYYDPETG KEDPSKNGVC
201: SNFLCDSKPG DKIQITGPSG KVMLLPESDP NATHIMIATG TGVAPYRGYL RRMFMENVPN KTFSGLAWLF LGVANTDSLL YDEEFTKYLK DHPDNFRFDK
301: ALSREEKNKK GGKMYVQDKI EEYSDEIFKL LDNGAHIYFC GLKGMMPGIQ DTLKRVAEER GESWDLKLSQ LRKNKQWHVE VY
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.