Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY09570 | Canola | plastid | 93.19 | 93.19 |
CDY02299 | Canola | plastid | 91.62 | 91.62 |
Bra032396.1-P | Field mustard | peroxisome, plastid, vacuole | 90.84 | 83.01 |
KRH11782 | Soybean | nucleus, plastid | 78.53 | 79.58 |
AT4G05390.1 | Thale cress | plastid | 78.27 | 79.1 |
PGSC0003DMT400010484 | Potato | plastid | 77.23 | 78.88 |
VIT_10s0003g04880.t01 | Wine grape | plastid | 77.75 | 78.78 |
KRH36793 | Soybean | plastid | 77.75 | 78.78 |
PGSC0003DMT400030830 | Potato | extracellular, plastid | 76.7 | 78.34 |
GSMUA_Achr4P28350_001 | Banana | plastid | 75.65 | 77.48 |
GSMUA_Achr4P31670_001 | Banana | plastid | 77.23 | 77.43 |
Solyc02g024050.2.1 | Tomato | extracellular | 75.65 | 77.27 |
EER90782 | Sorghum | plastid | 75.92 | 76.32 |
Os07t0147900-01 | Rice | plastid | 75.39 | 76.19 |
OQU88435 | Sorghum | plastid | 74.35 | 74.54 |
TraesCS5D01G431300.1 | Wheat | plastid | 73.3 | 74.47 |
TraesCS5A01G423000.1 | Wheat | plastid | 73.3 | 74.47 |
TraesCS2A01G252800.1 | Wheat | plastid | 73.04 | 74.01 |
TraesCS5B01G424900.1 | Wheat | plastid | 72.25 | 73.99 |
Zm00001d034345_P001 | Maize | plastid | 75.92 | 73.98 |
TraesCS2D01G253400.1 | Wheat | golgi | 72.77 | 73.55 |
Os03t0784700-01 | Rice | plastid | 72.77 | 73.55 |
HORVU5Hr1G103180.1 | Barley | plastid | 72.77 | 72.02 |
Zm00001d018794_P003 | Maize | plastid | 73.82 | 69.8 |
HORVU2Hr1G038830.1 | Barley | plastid | 73.56 | 65.35 |
TraesCS2B01G272500.1 | Wheat | plastid | 35.08 | 60.91 |
AT5G66190.1 | Thale cress | plastid | 42.93 | 45.56 |
AT1G20020.1 | Thale cress | plastid | 40.84 | 42.28 |
Protein Annotations
KEGG:00195+1.18.1.2 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | MapMan:50.1.17 | EntrezGene:839930 | ProteinID:AAF19753.1 |
ProteinID:AEE31235.1 | ProteinID:AEE31236.1 | ProteinID:AEE31237.1 | EMBL:AF424594 | ArrayExpress:AT1G30510 | EnsemblPlantsGene:AT1G30510 |
RefSeq:AT1G30510 | TAIR:AT1G30510 | RefSeq:AT1G30510-TAIR-G | EnsemblPlants:AT1G30510.2 | TAIR:AT1G30510.2 | Symbol:ATRFNR2 |
EMBL:AY088018 | EMBL:AY140017 | Unigene:At.25172 | EMBL:BT008468 | InterPro:FNR | InterPro:FNR_plant_Cyanobacteria |
InterPro:Fd_Rdtase_FAD-bd | InterPro:Flavoprot_Pyr_Nucl_cyt_Rdtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004324 | GO:GO:0005488 |
GO:GO:0005507 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016491 |
GO:GO:0055114 | InterPro:IPR017927 | RefSeq:NP_564355.1 | RefSeq:NP_849734.1 | RefSeq:NP_973942.1 | InterPro:OxRdtase_FAD/NAD-bd |
PFAM:PF00175 | PIRSF:PIRSF000361 | PIRSF:PIRSF501178 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00371 | PFscan:PS51384 | PANTHER:PTHR43314 |
PANTHER:PTHR43314:SF6 | UniProt:Q9S9P8 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 | SUPFAM:SSF63380 | UniParc:UPI00000AA629 |
SEG:seg | : | : | : | : | : |
Description
RFNR2Ferredoxin--NADP reductase, root isozyme 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S9P8]
Coordinates
chr1:-:10806930..10809184
Molecular Weight (calculated)
42791.7 Da
IEP (calculated)
8.846
GRAVY (calculated)
-0.607
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHSAVSQAG AVSVSIENQR SLRRSVFKQN NSISFNSKSW SSSLALNQKT TSIRDGKRYP STTICMSVQQ TSSSKVTVSP IELEDPKDPP LNLYKPKESY
101: TAKIVSVERV VGPKAPGETC HIVIDHDGNL PYWEGQSYGV IPPGENPKKP GAPHNVRLYS IASTRYGDFF DGKTASLCVR RAVYYDPETG KEDPSKNGVC
201: SNFLCDSKPG DKIQITGPSG KVMLLPESDP NATHIMIATG TGVAPYRGYL RRMFMENVPN KTFSGLAWLF LGVANTDSLL YDEEFTKYLK DHPDNFRFDK
301: ALSREEKNKK GGKMYVQDKI EEYSDEIFKL LDNGAHIYFC GLKGMMPGIQ DTLKRVAEER GESWDLKLSQ LRKNKQWHVE VY
101: TAKIVSVERV VGPKAPGETC HIVIDHDGNL PYWEGQSYGV IPPGENPKKP GAPHNVRLYS IASTRYGDFF DGKTASLCVR RAVYYDPETG KEDPSKNGVC
201: SNFLCDSKPG DKIQITGPSG KVMLLPESDP NATHIMIATG TGVAPYRGYL RRMFMENVPN KTFSGLAWLF LGVANTDSLL YDEEFTKYLK DHPDNFRFDK
301: ALSREEKNKK GGKMYVQDKI EEYSDEIFKL LDNGAHIYFC GLKGMMPGIQ DTLKRVAEER GESWDLKLSQ LRKNKQWHVE VY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.