Factsheet for Os06t0111400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 4
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0111300-00	Rice	plastid	7.27	10.54
CDX92196	Canola	cytosol	3.34	9.6
PGSC0003DMT400001470	Potato	nucleus	1.73	8.52
Os09t0423300-01	Rice	mitochondrion	8.88	8.0
Os06t0199100-01	Rice	cytosol	9.92	6.7

Protein Annotations

Gene3D:1.10.400.10	MapMan:26.8.1.1.2.1	Gene3D:3.40.50.300	EntrezGene:4339891	EMBL:AK069834	ProteinID:BAA93022.1
ProteinID:BAF18499.1	ProteinID:BAS95790.1	ProteinID:BAS95791.1	ProteinID:EAZ35577.1	GO:GO:0000166	GO:GO:0001664
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0004871	GO:GO:0005102	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005834
GO:GO:0005886	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186	GO:GO:0007188	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0019001	GO:GO:0031683	InterPro:GproteinA_insert
InterPro:Gprotein_alpha_su	InterPro:IPR011025	EnsemblPlantsGene:Os06g0111400	EnsemblPlants:Os06t0111400-01	InterPro:P-loop_NTPase	PFAM:PF00503
PRINTS:PR00318	PANTHER:PTHR10218	PANTHER:PTHR10218:SF291	UniProt:Q9LI02	SMART:SM00275	SUPFAM:SSF47895
SUPFAM:SSF52540	UniParc:UPI00000A128C	RefSeq:XP_015643712.1	:	:	:

Description

Guanine nucleotide binding protein (G-protein), alpha subunit family protein. (Os06t0111400-01);Similar to predicted protein. (Os06t0111400-02)

Coordinates

chr6:-:634367..640450

Molecular Weight (calculated)

97834.5 Da

IEP (calculated)

5.408

GRAVY (calculated)

-0.573

Length

867 amino acids

Sequence
(BLAST)

001: MAGAGAVGGS NWEEMVRRML PPGTTIPEAP ANLDYSIALE YDGPPVSYEL PRIDPVDLPA IPTAQPVSGP LVPGRSNGVV APVVRPVFMP PVHRKQDAHR
101: AEPPPVAAQG RRRRSSESVD SAPQNEGFSD DDDSCSVSQE SAHNFHGQRG GRTAAQEGRR AQVVTFGVTE DSRYESKEFD DVSEQYVAVT KKEKRGRTCS
201: RCGKRKWESK ESCIVCDARF CSYCVLRAMG SMPEGRKCIT CIGQPIDESK RSKLGKGSRI LSRLLSPLEV RQILKAEKEC QANQLRPEQL IINGFPLNPD
301: EMASLLSCQR PPQKLKPGRY WYDKESGLWG KEGEKPDRVV STNLTFNGKL QPNASNGNTQ VYMNGREITK IELRVLKIAQ VQCPRDTHFW VYHDGGYEEE
401: GQNNIKGKIW ESPVTRFACA LFSLPVPPAN SDEPKDEAPY SARTVPDYLD QKRIQKLLIL GSPGAGTSTI FKQAKLLYDT RFTQEELDSI KLMIQSNMFK
501: YLGILLEGRE RFEEEALAGS NNPSSEDENT QHDGNKSNGS DSCIYSINAK LKKFSDWLLD IIAMGDLDAF FPAATREYAP IVEEMWKDPA IQATYKRKDE
601: LHFLPDVAEY FLSRAIEVSS NEYEPSEKDI IYAEGVTQGN GLAFIEFTLD DRSPMSEMYT DNHEPHSQTL NKYQLIRVSA KGMNEGCKWV EMFEDVSMVI
701: FSVALSDYDQ LGAPSSGGNS PLVNKMIQSR DLFEATIRQP CFRDMPFVLV LNKFDLFEEK IGRVPLSTCE WFSDFCPLRT HHNNQSLAHQ AFYYVAMKFK
801: ELYAACTDRK LFVWQARARD RLTVDEAFKF IREVLKWEDE KDGGGYYPDE SFYSTTELSS SRLIRQE

Best Arabidopsis Sequence Match ( AT1G31930.4 )
(BLAST)

001: MEKKDEGESW KEMVRKMLPP GAPLPEDPSE FDYSIALEYT GPPPVHDIPR VSPVDVNPRV NNPIPLPVSR IAGGVTSSSG GSPASSESVV SVLHNNPESS
101: SGSASVSPVS GHRQNGNQVR RPVVKFKPVD DHDRIEGREA AEEEDNNVEA ETERERKVHE CTASTKRRKK KKKSECYRCG KAKWENKETC IVCDEKYCGN
201: CVLRAMGSMP EGRKCVSCIG QAIDESKRSK LGKHSRVLSR LLSPLEVKQI MKAEKECTAN QLRPEQLIVN GYPLKPEEMA DLLNCLLPPQ KLKPGRYWYD
301: KESGLWGKEG EKPDRVISSN LNFTGKLSPD ASNGNTEVYI NGREITKLEL RILKLANVQC PRDTHFWVYD DGRYEEEGQN NIRGNIWEKA STRFMCALFS
401: LPVPQGQPRG TVQPSSNYAT VPNYIEHKKI QKLLLLGIEG SGTSTIFKQA KFLYGNKFSV EELQDIKLMV QSNMYRYLSI LLDGRERFEE EALSHTRGLN
501: AVEGDSGGEE ANDEGTVTTP QSVYTLNPRL KHFSDWLLDI IATGDLDAFF PAATREYAPL VEEVWKDPAI QATYRRKDEL HFLPDVAEYF LSRAMEVSSN
601: EYEPSERDIV YAEGVTQGNG LAFMEFSLSD HSPMSESYPE NPDALSSPQP KYQLIRVNAK GMNDSCKWVE MFEDVRAVIF CISLSDYDQI NITPESSGTV
701: QYQNKMIQSK ELFESMVKHP CFKDTPFILI LNKYDQFEEK LNRAPLTSCD WFSDFCPVRT NNNVQSLAYQ AYFYVAMKFK LLYFSITGQK LFVWQARARD
801: RANVDEGFKY VREVLKWDEE KEESYLNGGG EDSFYSTDMS SSPYRPEE

Arabidopsis Description

XLG3Extra-large guanine nucleotide-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C516]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.