Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • plastid 1
  • vacuole 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid, vacuole
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:plastid, vacuole
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU89957 Sorghum cytosol 68.25 77.04
Zm00001d006375_P001 Maize cytosol 74.65 71.09
Os04t0554000-00 Rice cytosol, nucleus, peroxisome 48.75 56.45
Os10t0553300-01 Rice cytosol, nucleus, peroxisome 55.99 52.62
Os02t0661100-01 Rice cytosol, nucleus, peroxisome, plastid 53.48 51.75
Os08t0409100-01 Rice peroxisome 52.65 51.08
Os03t0386500-01 Rice cytosol, extracellular, peroxisome 42.62 49.35
Os02t0753000-01 Rice cytosol 49.58 48.5
Os09t0369400-01 Rice plastid 49.58 47.47
Os07t0624600-01 Rice cytosol 46.8 45.9
Os06t0222100-00 Rice cytosol 31.2 28.28
Protein Annotations
MapMan:3.3.2Gene3D:3.40.50.1000EntrezGene:4343248EMBL:AK070085ProteinID:BAF21569.1ProteinID:BAT01513.1
ProteinID:EEE67179.1GO:GO:0003674GO:GO:0003824GO:GO:0004805GO:GO:0005975GO:GO:0005992
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016311GO:GO:0016787
InterPro:HAD-SF_hydro_IIBInterPro:HAD-like_sfInterPro:HAD_sfInterPro:IPR023214EnsemblPlantsGene:Os07g0485000EnsemblPlants:Os07t0485000-01
PFAM:PF02358PANTHER:PTHR43768PANTHER:PTHR43768:SF15UniProt:Q0D6F4SUPFAM:SSF56784TIGRFAMs:TIGR00685
TIGRFAMs:TIGR01484InterPro:Trehalose_PPaseUniParc:UPI0000E12B10RefSeq:XP_015647909.1::
Description
TPP10Similar to Trehalose-6-phosphate phosphatase. (Os07t0485000-01)
Coordinates
chr7:+:17816192..17820602
Molecular Weight (calculated)
40438.6 Da
IEP (calculated)
7.289
GRAVY (calculated)
-0.317
Length
359 amino acids
Sequence
(BLAST)
001: MGSCGNGRSS EYDDPASLEK MEELVLPLKL MPLHTNGRLY DMRLSSPTAT CVINSSSGSF DPIYRAWTKK YPSALNAFDH IVAYGKGKKI ALFLDYDGTL
101: SPIVDEPDNA IMSDQMREVV RNAALHLPTA IISGRSRDKV FDFVKLTELY YAGSHGMDIM GPVGEHDSVT NHRSSINSNR KQGKGVKIFQ AGTEFLPMIN
201: EVFRLLIDKT KAIDGVKIEN NKFCVSVHYR NVEEKNWQLV SQCTNDVLKV YPRLRLTHGR KVLEIRPVID WNKGKAVEFL LDSLDLASCK NVLPIYIGDD
301: CTDEDAFKVL RDDKRGFGIL VSSVPKDSHA LYSLIDPSEV MEFLKRLVMW KNEEASHNK
Best Arabidopsis Sequence Match ( AT5G51460.4 )
(BLAST)
001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMLK
101: YPSALTSFEK IMSFAKGKRI ALFLDYDGTL SPIVEEPDCA YMSSAMRSAV QNVAKYFPTA IISGRSRDKV YEFVNLSELY YAGSHGMDIM SPAGESLNHE
201: HSRTVSVYEQ GKDVNLFQPA SEFLPMIDKV LCSLIESTKD IKGVKVEDNK FCISVHYRNV EEKNWTLVAQ CVDDVIRTYP KLRLTHGRKV LEIRPVIDWD
301: KGKAVTFLLE SLGLNNCEDV LPIYVGDDRT DEDAFKVLRD GPNHGYGILV SAVPKDSNAF YSLRDPSEVM EFLKSLVTWK RSMG
Arabidopsis Description
TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.