Factsheet for Zm00001d006375_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052226_P001	Maize	cytosol	25.46	91.43
OQU89957	Sorghum	cytosol	75.6	89.62
Os07t0485000-01	Rice	cytosol, nucleus, peroxisome	71.09	74.65
Zm00001d047110_P001	Maize	cytosol	54.11	53.54
Zm00001d006913_P002	Maize	plastid	44.03	50.46
Zm00001d052227_P001	Maize	cytosol	47.21	50.0
Zm00001d032298_P002	Maize	plastid	48.28	48.92
Zm00001d005658_P001	Maize	plastid	48.81	47.92
Zm00001d020272_P001	Maize	peroxisome, plastid	50.66	47.87
Zm00001d029371_P001	Maize	cytosol	45.09	46.7
Zm00001d022193_P001	Maize	cytosol	46.42	46.05
Zm00001d022192_P002	Maize	plastid	44.56	45.41
Zm00001d018082_P001	Maize	cytosol	47.48	44.97
Zm00001d017502_P002	Maize	extracellular	45.09	38.37
Zm00001d044854_P001	Maize	cytosol	41.91	36.83

Protein Annotations

EntrezGene:103647672	MapMan:3.3.2	Gene3D:3.40.50.1000	UniProt:A0A1D6EVQ9	GO:GO:0003674	GO:GO:0003824
GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	ProteinID:ONM23657.1	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF15	SUPFAM:SSF56784
TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0004DEB0FE	EnsemblPlantsGene:Zm00001d006375	EnsemblPlants:Zm00001d006375_P001
EnsemblPlants:Zm00001d006375_T001	:	:	:	:	:

Description

Probable trehalose-phosphate phosphatase F

Coordinates

chr2:+:206066839..206069070

Molecular Weight (calculated)

41947.4 Da

IEP (calculated)

6.875

GRAVY (calculated)

-0.292

Length

377 amino acids

Sequence
(BLAST)

001: MGSHANGSTC AGDGPPPMEK RKEPAFPLKT MPLHANGWLN DMKLSSPTAV PVNIGSNSVA FDPIYRAWTQ KYPSALNAFE RIVACGKGKK IALFLDYDGT
101: LSPIVDEPDN AVMSDQMREV VRSAALHLPT AIISGRSCDK VFDFVRLTEL YYAGSHGMDI MGPVGKTGSV TDHRSRGTNS SKKQDKEMQI FQAASEFLPM
201: IDEVFGLLVD KVRGIDGARV ENNKFCVSVH YRNVNEKDWA LVARCTDDVL KAYPRLRLSH GRKVLEVRPM VDWNKGKAVE FLLDSLGLAD SDEVLPIYIG
301: DDRTDEDAFK VLRGNKRGLG ILVSSVPKES QALYSLLDPP EVMDFLKRLV KWKEEEEAQR ITVKQLLVSV DDFRVNL

Best Arabidopsis Sequence Match ( AT5G51460.4 )
(BLAST)

001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMLK
101: YPSALTSFEK IMSFAKGKRI ALFLDYDGTL SPIVEEPDCA YMSSAMRSAV QNVAKYFPTA IISGRSRDKV YEFVNLSELY YAGSHGMDIM SPAGESLNHE
201: HSRTVSVYEQ GKDVNLFQPA SEFLPMIDKV LCSLIESTKD IKGVKVEDNK FCISVHYRNV EEKNWTLVAQ CVDDVIRTYP KLRLTHGRKV LEIRPVIDWD
301: KGKAVTFLLE SLGLNNCEDV LPIYVGDDRT DEDAFKVLRD GPNHGYGILV SAVPKDSNAF YSLRDPSEVM EFLKSLVTWK RSMG

Arabidopsis Description

TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.