Factsheet for Zm00001d017502_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 4
peroxisome 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

extracellular: 22192489

msms PMID: 22192489 doi

K Witzel, M Shahzad, A Matros, HP Mock, KH Mühling

Institute of Plant Nutrition and Soil Science, Christian Albrechts University, Hermann-Rodewald-Strasse 2, 24118 Kiel, Germany. khmuehling@plantnutrition.uni-kiel.de.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85690	Sorghum	nucleus, plastid	70.2	84.05
Os02t0661100-01	Rice	cytosol, nucleus, peroxisome, plastid	61.17	73.05
TraesCS6D01G230500.1	Wheat	cytosol, plastid	59.82	71.24
HORVU6Hr1G063370.1	Barley	plastid	59.37	70.89
HORVU0Hr1G023540.3	Barley	plastid	59.37	70.89
TraesCS6A01G248400.1	Wheat	cytosol, plastid	59.37	70.7
TraesCS6B01G276300.1	Wheat	plastid	59.14	70.43
Zm00001d047110_P001	Maize	cytosol	41.76	48.56
Zm00001d032298_P002	Maize	plastid	39.5	47.04
Zm00001d006913_P002	Maize	plastid	34.54	46.5
Zm00001d006375_P001	Maize	cytosol	38.37	45.09
Zm00001d052227_P001	Maize	cytosol	36.12	44.94
Zm00001d005658_P001	Maize	plastid	38.83	44.79
Zm00001d020272_P001	Maize	peroxisome, plastid	39.05	43.36
Zm00001d029371_P001	Maize	cytosol	34.99	42.58
Zm00001d022192_P002	Maize	plastid	34.99	41.89
Zm00001d022193_P001	Maize	cytosol	35.44	41.32
Zm00001d018082_P001	Maize	cytosol	35.89	39.95
Zm00001d044854_P001	Maize	cytosol	37.7	38.93
Zm00001d052226_P001	Maize	cytosol	8.13	34.29

Protein Annotations

Gene3D:3.40.50.1000	MapMan:35.1	UniProt:A0A1D6HF51	ProteinID:AQK73271.1	ProteinID:AQK73272.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358
PANTHER:PTHR43768	PANTHER:PTHR43768:SF14	SUPFAM:SSF56784	TIGRFAMs:TIGR00685	InterPro:Trehalose_PPase	UniParc:UPI000842FF81
EnsemblPlantsGene:Zm00001d017502	EnsemblPlants:Zm00001d017502_P002	EnsemblPlants:Zm00001d017502_T002	SEG:seg	:	:

Description

trehalose-6-phosphate phosphatase6 trehalose-6-phosphate phosphatase6

Coordinates

chr5:-:197722483..197728745

Molecular Weight (calculated)

48580.0 Da

IEP (calculated)

5.424

GRAVY (calculated)

-0.333

Length

443 amino acids

Sequence
(BLAST)

001: MDMGSGSSPV ITDPISISPP LLGGLTSNLM PFSVMSGGCS SSPSMSASSR RKIEEVLVNG LLDAMKSSSP RKKHNLAFGQ DNSPDEDPAY TAWLSKCPSA
101: LASFKQIVAN AQGRRIAVFL DYDGTLSPIV DDPDKAFMSP VMRAAVRNVA KYFPTAIVSG RSRKKVFEFV KLTELYYAGS HGMDIVTSAA AHATEKCKEA
201: NLFQPACEFL PMINEDWKVV AGLVKQVLEA FPRLKVTNGR MVLEVRPVID WDKGKAVEFL LRSLGLSDSE DVVPIYIGDD RTDEDAFKVL RERSCGYGIL
301: VSQVPKDTEA FYSLRDPSEV MGFLNSLVFG DPSFEKSGKK ARNVGEKSVM EDLRPAKIEV PLSQGKESGR HYEMAEGMDV EKNIEDDKGY IDNPDIGDKK
401: GVTMEGDHVE GIRRSSRLES NDEMKIADKA TSRAMAKDAF INK

Best Arabidopsis Sequence Match ( AT5G51460.1 )
(BLAST)

001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMQL
101: KYPSALTSFE KIMSFAKGKR IALFLDYDGT LSPIVEEPDC AYMSSAMRSA VQNVAKYFPT AIISGRSRDK VYEFVNLSEL YYAGSHGMDI MSPAGESLNH
201: EHSRTVSVYE QGKDVNLFQP ASEFLPMIDK VLCSLIESTK DIKGVKVEDN KFCISVHYRN VEEKNWTLVA QCVDDVIRTY PKLRLTHGRK VLEIRPVIDW
301: DKGKAVTFLL ESLGLNNCED VLPIYVGDDR TDEDAFKVLR DGPNHGYGIL VSAVPKDSNA FYSLRDPSEV MEFLKSLVTW KRSMG

Arabidopsis Description

TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.