Factsheet for TraesCS6D01G230500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G248400.1	Wheat	cytosol, plastid	98.39	98.39
TraesCS6B01G276300.1	Wheat	plastid	97.31	97.31
HORVU0Hr1G023540.3	Barley	plastid	96.24	96.5
HORVU6Hr1G063370.1	Barley	plastid	96.24	96.5
Os02t0661100-01	Rice	cytosol, nucleus, peroxisome, plastid	85.22	85.44
OQU85690	Sorghum	nucleus, plastid	80.91	81.35
TraesCS2D01G409300.1	Wheat	plastid	62.9	63.24
Zm00001d017502_P002	Maize	extracellular	71.24	59.82
TraesCS1D01G213700.1	Wheat	plastid	57.53	56.17
TraesCS5D01G200800.1	Wheat	plastid	51.08	50.94
TraesCS7D01G182600.1	Wheat	peroxisome, plastid	48.66	49.86
TraesCS6D01G281100.1	Wheat	plastid	48.92	49.32
TraesCS2D01G168200.1	Wheat	cytosol, plastid	46.77	48.6
TraesCS2D01G168100.1	Wheat	cytosol, plastid	45.43	47.21
TraesCS2D01G168300.1	Wheat	peroxisome, plastid	46.24	43.88
TraesCS3D01G085800.1	Wheat	mitochondrion	36.29	23.12

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805
GO:GO:0005975	GO:GO:0005992	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009409	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF14
SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	EnsemblPlantsGene:TraesCS6D01G230500	EnsemblPlants:TraesCS6D01G230500.1	InterPro:Trehalose_PPase
TIGR:cd01627	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:323713668..323715717

Molecular Weight (calculated)

41049.3 Da

IEP (calculated)

5.520

GRAVY (calculated)

-0.192

Length

372 amino acids

Sequence
(BLAST)

001: MDLSNGSPVI SDPMAMSQSL MGVLPSNMMP FSVRPGGYSG AGGAGVNVSR RKIEEVLVSG LLDAMKSSSP RKKHNVVFGQ ENLPEEDPAY SAWMAKCPSA
101: LASFKQIVAS AQGKKIAVFL DYDGTLSPIV DDPEKAVMSP VMRAAVRNVA KYFPAAIVSG RSRKKVLEFV KLKELCYAGS HGMDIMTSSS AHYEHNTEKG
201: KEANLFQPAR DFLPMIDEVS KALLEVTSGI EGASVEDNKF CVSVHYRNVD EKDWELVARL VNEVLEDFPA LKVTNGRMVL EVRPVIDWDK GKAVEFLLQS
301: LGLSDSENVI PIYIGDDRTD EDAFKVLRER NCGYGILVSQ VPKETEAFYS LRDPSEVMEF LNSLVRWKKH SL

Best Arabidopsis Sequence Match ( AT5G51460.4 )
(BLAST)

001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMLK
101: YPSALTSFEK IMSFAKGKRI ALFLDYDGTL SPIVEEPDCA YMSSAMRSAV QNVAKYFPTA IISGRSRDKV YEFVNLSELY YAGSHGMDIM SPAGESLNHE
201: HSRTVSVYEQ GKDVNLFQPA SEFLPMIDKV LCSLIESTKD IKGVKVEDNK FCISVHYRNV EEKNWTLVAQ CVDDVIRTYP KLRLTHGRKV LEIRPVIDWD
301: KGKAVTFLLE SLGLNNCEDV LPIYVGDDRT DEDAFKVLRD GPNHGYGILV SAVPKDSNAF YSLRDPSEVM EFLKSLVTWK RSMG

Arabidopsis Description

TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.