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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:
  • plastid 5
  • peroxisome 1
  • vacuole 1
  • nucleus 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G230500.1 Wheat cytosol, plastid 85.44 85.22
TraesCS6A01G248400.1 Wheat cytosol, plastid 84.64 84.41
TraesCS6B01G276300.1 Wheat plastid 84.64 84.41
HORVU0Hr1G023540.3 Barley plastid 84.37 84.37
HORVU6Hr1G063370.1 Barley plastid 84.37 84.37
OQU85690 Sorghum nucleus, plastid 83.29 83.51
Os04t0554000-00 Rice cytosol, nucleus, peroxisome 52.02 62.26
Zm00001d017502_P002 Maize extracellular 73.05 61.17
Os10t0553300-01 Rice cytosol, nucleus, peroxisome 56.6 54.97
Os07t0485000-01 Rice cytosol, nucleus, peroxisome 51.75 53.48
Os08t0409100-01 Rice peroxisome 53.1 53.24
Os03t0386500-01 Rice cytosol, extracellular, peroxisome 44.47 53.23
Os09t0369400-01 Rice plastid 53.1 52.53
Os02t0753000-01 Rice cytosol 49.6 50.14
Os07t0624600-01 Rice cytosol 49.33 50.0
Os06t0222100-00 Rice cytosol 31.27 29.29
Protein Annotations
MapMan:3.3.2Gene3D:3.30.70.1020Gene3D:3.40.50.1000EntrezGene:4330221EMBL:AB120515EMBL:AK103391
ProteinID:BAD25622.1ProteinID:BAD25753.1ProteinID:BAF09559.1ProteinID:BAS80139.1ProteinID:EEE57517.1GO:GO:0003674
GO:GO:0003824GO:GO:0004805GO:GO:0005975GO:GO:0005992GO:GO:0006950GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009409GO:GO:0009628GO:GO:0009651GO:GO:0009987
GO:GO:0016311GO:GO:0016787InterPro:HAD-SF_hydro_IIBInterPro:HAD-like_sfInterPro:HAD_sfInterPro:IPR023214
EnsemblPlantsGene:Os02g0661100EnsemblPlants:Os02t0661100-01PFAM:PF02358PANTHER:PTHR43768PANTHER:PTHR43768:SF14UniProt:Q75WV3
SUPFAM:SSF56784TIGRFAMs:TIGR00685TIGRFAMs:TIGR01484InterPro:Trehalose_PPaseUniParc:UPI000034E4B6RefSeq:XP_015623255.1
Description
TREHALOSE-6-PHOSPHATE PHOSHPHATASE 1Similar to Trehalose-6-phosphate phosphatase. (Os02t0661100-01);Similar to Trehalose-phosphate phosphatase. (Os02t0661100-02)
Coordinates
chr2:-:26767607..26771623
Molecular Weight (calculated)
41130.4 Da
IEP (calculated)
6.272
GRAVY (calculated)
-0.160
Length
371 amino acids
Sequence
(BLAST)
001: MDLSNSSPVI TDPVAISQQL LGGLPSNLMQ FSVMPGGYSS SGMNVGVSRL KIEEVLVNGL LDAMKSSSPR RRLNVAFGED NSSEEEDPAY SAWMAKCPSA
101: LASFKQIVAS AQGKKIAVFL DYDGTLSPIV DDPDKAVMSP VMRAAVRNVA KYFPTAIVSG RSRNKVFEFV KLKELYYAGS HGMDIMAPSA NHEHSAEKSK
201: QANLFQPAHD FLPMIDEVTK SLLQVVSGIE GATVENNKFC VSVHYRNVAE KDWKLVARLV NEVLEAFPRL KVTNGRMVLE VRPVIDWDKG KAVEFLLQSL
301: GLNDSENVIP IYIGDDRTDE DAFKVLRQRN CGYGILVSQV PKETEAFYSL RDPSEVMEFL NFLVRWKKHS V
Best Arabidopsis Sequence Match ( AT5G51460.4 )
(BLAST)
001: MDMKSGHSSP VMTDSPPISN SRLTIRQNRL PYSSAAATAI SQNNNLLLTV PRKKTGILDD VKSNGWLDAM KSSSPPPTIL NKDNLSNDAT DMTYREWMLK
101: YPSALTSFEK IMSFAKGKRI ALFLDYDGTL SPIVEEPDCA YMSSAMRSAV QNVAKYFPTA IISGRSRDKV YEFVNLSELY YAGSHGMDIM SPAGESLNHE
201: HSRTVSVYEQ GKDVNLFQPA SEFLPMIDKV LCSLIESTKD IKGVKVEDNK FCISVHYRNV EEKNWTLVAQ CVDDVIRTYP KLRLTHGRKV LEIRPVIDWD
301: KGKAVTFLLE SLGLNNCEDV LPIYVGDDRT DEDAFKVLRD GPNHGYGILV SAVPKDSNAF YSLRDPSEVM EFLKSLVTWK RSMG
Arabidopsis Description
TPPATrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UCG0]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.