Factsheet for TraesCS6B01G276300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
peroxisome 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G248400.1	Wheat	cytosol, plastid	97.58	97.58
TraesCS6D01G230500.1	Wheat	cytosol, plastid	97.31	97.31
HORVU0Hr1G023540.3	Barley	plastid	95.43	95.69
HORVU6Hr1G063370.1	Barley	plastid	95.43	95.69
Os02t0661100-01	Rice	cytosol, nucleus, peroxisome, plastid	84.41	84.64
OQU85690	Sorghum	nucleus, plastid	79.84	80.27
TraesCS2B01G430700.1	Wheat	plastid	63.71	63.88
Zm00001d017502_P002	Maize	extracellular	70.43	59.14
TraesCS7B01G085800.1	Wheat	peroxisome, plastid	48.12	49.18
TraesCS2B01G187100.1	Wheat	cytosol, plastid	46.24	48.04
TraesCS1B01G224300.2	Wheat	golgi, vacuole	56.45	47.95
TraesCS2B01G187200.1	Wheat	cytosol, plastid	45.43	47.21
TraesCS2B01G187000.1	Wheat	peroxisome, plastid	45.16	46.93
TraesCS5B01G193100.2	Wheat	plastid	50.81	45.54
TraesCS6B01G330900.1	Wheat	cytosol	48.66	44.47
TraesCS2B01G193300.1	Wheat	plasma membrane	40.32	26.83

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805
GO:GO:0005975	GO:GO:0005992	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009409	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF14
SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	EnsemblPlantsGene:TraesCS6B01G276300	EnsemblPlants:TraesCS6B01G276300.1	InterPro:Trehalose_PPase
TIGR:cd01627	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:500210094..500212162

Molecular Weight (calculated)

41283.7 Da

IEP (calculated)

6.097

GRAVY (calculated)

-0.232

Length

372 amino acids

Sequence
(BLAST)

001: MDLSNGSPVI SDPMSMSQSL MGVLPSNMMP FSVRPGGYSG AGGAGVNVSR RKIEEVLVSG LLDAMKSSSP RKKHNVVFGE ENLPEEDPAY STWMAKCPSA
101: LASFKQIVAS AQGKKIAVFL DYDGTLSPIV DDPEKAVMSP VMRAAVRNVA KYFPAAIVSG RSRKKVLEFV KLKELCYAGS HGMDIMTSSS AHYERNAEKG
201: KEANLFQPAR DFLPMIDEVS KVLLEVTSRI EGASVEDNKF CVSVHYRNVD EKDWELVARL VNEVLEDFPR LKVTNGRMVL EVRPVIDWDK GKAVEFLLQS
301: LGLSDSEKVI PIYIGDDRTD EDAFKVLRER NCGYGILVSQ APKETEAFYS LRDPSEVMEF LNSLVRWKKH SL

Best Arabidopsis Sequence Match ( AT4G22590.1 )
(BLAST)

001: MDLNINKTTP VLSDPTTPVS KTRLGSSFPS GRFMMNSRKK IPKLDDVRSN GWLDAMISSS PPRKRLVKDF NIEIAPEDDF SQRAWMLKYP SAITSFAHIA
101: AQAKNKKIAV FLDYDGTLSP IVDDPDRAIM SDAMRAAVKD VAKYFPTAII SGRSRDKVYQ LVGLTELYYA GSHGMDIMTP VNPNGSPEDP NCIKTTDQQG
201: EEVNLFQPAK EFIPVIEEVY NNLVEITKCI KGAKVENHKF CTSVHYRNVD EKDWPLVAQR VHDHLKRYPR LRITHGRKVL EVRPVIEWNK GKAVEFLLES
301: LGLSNNDEFL PIFIGDDKTD EDAFKVLREG NRGFGILVSS VPKESNAFYS LRDPSEVKKF LKTLVKWGKM ESSKTSF

Arabidopsis Description

TPPGTrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UWC3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.