Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G281100.1 | Wheat | plastid | 88.94 | 98.1 |
| HORVU6Hr1G074960.2 | Barley | cytosol | 85.75 | 93.07 |
| TraesCS6A01G301800.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 89.19 | 87.26 |
| Zm00001d052227_P001 | Maize | cytosol | 75.43 | 86.24 |
| KXG30780 | Sorghum | cytosol | 76.41 | 83.6 |
| Os02t0753000-01 | Rice | cytosol | 74.69 | 82.83 |
| Zm00001d018082_P001 | Maize | cytosol | 75.18 | 76.88 |
| TraesCS7B01G085800.1 | Wheat | peroxisome, plastid | 61.43 | 68.68 |
| CDY26849 | Canola | mitochondrion | 37.1 | 64.81 |
| VIT_18s0001g05300.t01 | Wine grape | plastid | 56.27 | 61.07 |
| Solyc04g072920.2.1 | Tomato | extracellular | 54.3 | 60.55 |
| PGSC0003DMT400024511 | Potato | peroxisome, plastid | 53.56 | 59.73 |
| AT1G22210.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 46.19 | 58.75 |
| KRH49582 | Soybean | mitochondrion | 41.03 | 58.6 |
| AT1G35910.1 | Thale cress | plastid | 53.07 | 58.54 |
| KRH62370 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 53.07 | 58.22 |
| KRH18894 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 52.33 | 57.26 |
| KRH30218 | Soybean | plastid | 29.98 | 57.01 |
| TraesCS2B01G187100.1 | Wheat | cytosol, plastid | 50.12 | 56.98 |
| KRH53087 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 53.07 | 56.84 |
| TraesCS5B01G193100.2 | Wheat | plastid | 57.49 | 56.39 |
| TraesCS2B01G187200.1 | Wheat | cytosol, plastid | 49.14 | 55.87 |
| KRH16701 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 51.84 | 55.67 |
| Bra008344.1-P | Field mustard | plastid | 51.11 | 55.17 |
| TraesCS2B01G187000.1 | Wheat | peroxisome, plastid | 48.4 | 55.03 |
| CDY14635 | Canola | plastid | 50.86 | 54.91 |
| CDY26848 | Canola | plastid | 51.11 | 54.88 |
| CDX87477 | Canola | plastid | 50.86 | 54.76 |
| Bra015631.1-P | Field mustard | plastid | 50.86 | 54.76 |
| CDX88416 | Canola | plastid | 50.61 | 54.5 |
| AT1G78090.1 | Thale cress | plastid | 49.39 | 53.74 |
| TraesCS6B01G276300.1 | Wheat | plastid | 44.47 | 48.66 |
| TraesCS2B01G430700.1 | Wheat | plastid | 43.49 | 47.71 |
| TraesCS1B01G224300.2 | Wheat | golgi, vacuole | 44.47 | 41.32 |
| CDY37091 | Canola | plastid | 23.34 | 36.54 |
| Bra034400.1-P | Field mustard | plastid | 23.34 | 36.54 |
| TraesCS2B01G193300.1 | Wheat | plasma membrane | 33.17 | 24.15 |
Protein Annotations
| MapMan:3.3.2 | Gene3D:3.30.70.1020 | Gene3D:3.40.50.1000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
| GO:GO:0005992 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HAD-SF_hydro_IIB |
| InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 | PFAM:PF02358 | PANTHER:PTHR43768 | PANTHER:PTHR43768:SF10 |
| SUPFAM:SSF56784 | TIGRFAMs:TIGR00685 | TIGRFAMs:TIGR01484 | EnsemblPlantsGene:TraesCS6B01G330900 | EnsemblPlants:TraesCS6B01G330900.1 | InterPro:Trehalose_PPase |
| TIGR:cd01627 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:581078825..581082535
Molecular Weight (calculated)
44294.4 Da
IEP (calculated)
8.415
GRAVY (calculated)
-0.147
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTSQDVVVS EMGIGAGGAA MPGSGAAGLF ACRSAASAGA MSMRQTYRDL AAAASRSANC TWAELEAMRA ASPTRSRPGT DVDELTAWMV SPAHPSCLHG
101: ARRFFTVHGC CLQAGGDSNL SLVLLCSEQR KHPSALGKFE QIASASKGKK IVMFLDYDGT LSPIVANPDA AYMSDAMREA VRDVAKHFPT AIVSGRCRDK
201: VHNFVGLSEL YYAGSHGMDI KGPGSNPESV LCQPASEFLP MIDEVYKVLV EKTKSTPGAK VENNKFCLSV HFRCVDEKRW NFLAEQVKAV IKDYPMLKLT
301: QGRKVFELRP SIMWDKGKAL EFLLESLGFA SCSDVLPVYI GDDRTDEDAF KVLRKRGQGV GILVSKCAKE TSASYSLQDP AEVMEFLLRL VDWKRRSSAP
401: PMVRPRV
101: ARRFFTVHGC CLQAGGDSNL SLVLLCSEQR KHPSALGKFE QIASASKGKK IVMFLDYDGT LSPIVANPDA AYMSDAMREA VRDVAKHFPT AIVSGRCRDK
201: VHNFVGLSEL YYAGSHGMDI KGPGSNPESV LCQPASEFLP MIDEVYKVLV EKTKSTPGAK VENNKFCLSV HFRCVDEKRW NFLAEQVKAV IKDYPMLKLT
301: QGRKVFELRP SIMWDKGKAL EFLLESLGFA SCSDVLPVYI GDDRTDEDAF KVLRKRGQGV GILVSKCAKE TSASYSLQDP AEVMEFLLRL VDWKRRSSAP
401: PMVRPRV
001: MTNHNALISD AKGSIGVAVR VPNQSLFSPG GGRYISIPRK KLVQKLEADP SQTRIHTWIE AMRASSPTRT RPGNISPLPE SDEEDEYSSW MAQHPSALTM
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR
Arabidopsis Description
TPPDProbable trehalose-phosphate phosphatase D [Source:UniProtKB/Swiss-Prot;Acc:Q67XC9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.