CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
peroxisome 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	92.08	93.82
KRH26019	Soybean	cytosol	19.0	75.79
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	70.98	72.51
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	70.18	70.0
KRH49582	Soybean	mitochondrion	52.51	69.82
KRH30218	Soybean	plastid	39.05	69.16
KRH75558	Soybean	cytosol, extracellular, peroxisome	11.35	65.15
KRH31279	Soybean	plastid	60.95	63.64
VIT_18s0001g05300.t01	Wine grape	plastid	62.8	63.47
KRG97593	Soybean	plastid	60.69	63.01
KRH59366	Soybean	plastid	59.89	62.71
KRH43210	Soybean	cytosol, nucleus, peroxisome	60.16	62.3
PGSC0003DMT400024511	Potato	peroxisome, plastid	58.58	60.82
Solyc04g072920.2.1	Tomato	extracellular	58.31	60.55
GSMUA_Achr2P22170_001	Banana	cytoskeleton, cytosol, peroxisome	52.51	59.94
AT1G22210.1	Thale cress	cytoskeleton, cytosol, peroxisome	50.4	59.69
Os02t0753000-01	Rice	cytosol	57.78	59.67
Zm00001d052227_P001	Maize	cytosol	55.94	59.55
KXG30780	Sorghum	cytosol	58.05	59.14
AT1G78090.1	Thale cress	plastid	58.05	58.82
Os08t0409100-01	Rice	peroxisome	57.26	58.65
GSMUA_Achr10P...	Banana	cytosol, plastid	52.24	58.24
Zm00001d032298_P002	Maize	plastid	56.73	57.8
TraesCS6D01G281100.1	Wheat	plastid	55.94	57.45
Zm00001d006913_P002	Maize	plastid	49.87	57.45
Os03t0386500-01	Rice	cytosol, extracellular, peroxisome	46.7	57.1
EES13815	Sorghum	peroxisome	56.2	56.65
GSMUA_Achr2P14790_001	Banana	cytosol	55.15	56.18
EER97569	Sorghum	cytosol, plastid	52.24	55.93
EER97568	Sorghum	cytosol, plastid	52.24	55.77
TraesCS5D01G200800.1	Wheat	plastid	54.88	55.76
TraesCS5A01G190000.1	Wheat	plastid	54.88	55.76
EER96661	Sorghum	plastid	55.94	55.64
GSMUA_Achr4P24170_001	Banana	cytosol	55.94	55.21
HORVU6Hr1G074960.2	Barley	cytosol	54.35	54.93
Os09t0369400-01	Rice	plastid	54.09	54.67
TraesCS7A01G180800.1	Wheat	peroxisome, plastid	51.98	54.57
KRG98938	Soybean	plastid	20.84	54.48
TraesCS7B01G085800.1	Wheat	peroxisome, plastid	52.24	54.4
TraesCS2A01G161000.1	Wheat	plastid	51.19	54.34
Zm00001d018082_P001	Maize	cytosol	56.99	54.27
TraesCS7D01G182600.1	Wheat	peroxisome, plastid	51.98	54.27
TraesCS2B01G187100.1	Wheat	cytosol, plastid	51.19	54.19
Zm00001d005658_P001	Maize	plastid	54.88	54.17
GSMUA_Achr3P01660_001	Banana	cytosol, mitochondrion, plastid	55.41	53.98
TraesCS2A01G161100.1	Wheat	cytosol, plastid	50.92	53.91
GSMUA_Achr7P11700_001	Banana	plastid	54.62	53.91
Zm00001d022192_P002	Maize	plastid	52.24	53.51
EER94771	Sorghum	cytosol, peroxisome, plastid	51.72	53.41
TraesCS2B01G187200.1	Wheat	cytosol, plastid	50.4	53.35
TraesCS2A01G161200.1	Wheat	cytosol, plastid	50.4	53.35
HORVU7Hr1G037140.1	Barley	plastid	50.92	53.31
Zm00001d029371_P001	Maize	cytosol	51.19	53.3
TraesCS2D01G168200.1	Wheat	cytosol, plastid	50.13	53.07
TraesCS2D01G168100.1	Wheat	cytosol, plastid	49.34	52.23
TraesCS2B01G187000.1	Wheat	peroxisome, plastid	49.34	52.23
KXG36741	Sorghum	cytosol	50.13	52.2
TraesCS6B01G330900.1	Wheat	cytosol	55.67	51.84
Zm00001d020272_P001	Maize	peroxisome, plastid	54.35	51.63
Os07t0624600-01	Rice	cytosol	49.08	50.82
TraesCS6A01G301800.1	Wheat	cytosol, nucleus, peroxisome, plastid	55.67	50.72
Zm00001d022193_P001	Maize	cytosol	50.66	50.53
TraesCS5B01G193100.2	Wheat	plastid	55.15	50.36
KXG19623	Sorghum	cytosol	51.19	50.13
KRH39976	Soybean	peroxisome	50.92	49.61
KRH62612	Soybean	cytosol	49.87	49.48
KRH23805	Soybean	cytosol	50.66	49.36
TraesCS2D01G168300.1	Wheat	peroxisome, plastid	50.66	48.98
HORVU5Hr1G058300.1	Barley	plastid	55.15	48.95
KRH04085	Soybean	nucleus, plastid	46.17	48.34
KRH56343	Soybean	cytosol	49.87	48.21
KRH06490	Soybean	cytosol	39.05	47.28
HORVU2Hr1G029290.1	Barley	golgi, mitochondrion, peroxisome, plastid	49.87	46.67
HORVU1Hr1G061580.4	Barley	plastid	24.54	45.81
KRH53451	Soybean	golgi, vacuole	40.63	41.96
KRH64499	Soybean	golgi, mitochondrion	40.37	41.69
Zm00001d044854_P001	Maize	cytosol	45.65	40.33
CDY37091	Canola	plastid	24.54	35.77
Bra034400.1-P	Field mustard	plastid	24.54	35.77
HORVU6Hr1G066240.1	Barley	plastid	13.19	34.48
KRH38605	Soybean	cytosol	39.58	29.01

Protein Annotations

EntrezGene:100785139	MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	EMBL:ACUP02008987	EnsemblPlantsGene:GLYMA_14G171700
GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:K7M7K7	EnsemblPlants:KRH16701	ProteinID:KRH16701
ProteinID:KRH16701.1	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF2	SUPFAM:SSF56784	TIGRFAMs:TIGR00685
TIGRFAMs:TIGR01484	TMHMM:TMhelix	InterPro:Trehalose_PPase	UniParc:UPI000233BC74	:	:

Description

hypothetical protein

Coordinates

chr14:-:42494827..42497815

Molecular Weight (calculated)

42543.2 Da

IEP (calculated)

9.982

GRAVY (calculated)

-0.445

Length

379 amino acids

Sequence
(BLAST)

001: MTNRNVNNTL MELAMSISNR SALPRAAVPG LMALFGGVLG PPQKKLLRKT LEDGSVNKGG NKVINTWIDS MRASSPTRSA KSTQNNQNQD PTSPWTLYHP
101: SALSMFDHIV CESKGKQIVT FLDYDGTLSP IVADPDKAYM SKKMRATLKD LARHFPTAIV SGRCLDKVYN FVRLAELYYA GSHGMDIKGP TNKRSTKKGN
201: EQVLFQPASE FLPMINEVYN ILVEKTKSVP GAKVENNKFC LSVHFRCVDE KNWASLGEQV SLVLNEYPKL KLTQGRKVLE IRPAIKWDKG KALEFLLESL
301: GYANSDNVFP IFIGDDRTDE DAFKVLRRRG QGIGILVSKI TKETDASYTL QDPTEVGQFL RHMVEWKRTS SQYQKLDSR

Best Arabidopsis Sequence Match ( AT1G35910.1 )
(BLAST)

001: MTNHNALISD AKGSIGVAVR VPNQSLFSPG GGRYISIPRK KLVQKLEADP SQTRIHTWIE AMRASSPTRT RPGNISPLPE SDEEDEYSSW MAQHPSALTM
101: FEEIAEASKG KQIVMFLDYD GTLSPIVENP DRAYMSEEMR EAVKGVARYF PTAIVTGRCR DKVRRFVKLP GLYYAGSHGM DIKGPSKRNK HNKNNKGVLF
201: QAANEFLPMI DKVSKCLVEK MRDIEGANVE NNKFCVSVHY RCVDQKDWGL VAEHVTSILS EYPKLRLTQG RKVLEIRPTI KWDKGKALEF LLESLGFANS
301: NDVLPIYIGD DRTDEDAFKV LRNKGQGFGI LVSKIPKETS ATYSLQEPSE VGEFLQRLVE WKQMSLRGR

Arabidopsis Description

TPPDProbable trehalose-phosphate phosphatase D [Source:UniProtKB/Swiss-Prot;Acc:Q67XC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.