CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
peroxisome 2
plastid 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59366	Soybean	plastid	93.44	94.48
KRH31279	Soybean	plastid	81.97	82.64
KRG97593	Soybean	plastid	81.42	81.64
KRH75558	Soybean	cytosol, extracellular, peroxisome	14.48	80.3
KRH26019	Soybean	cytosol	20.49	78.95
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	65.3	75.39
PGSC0003DMT400056161	Potato	cytosol	43.99	75.23
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	54.64	71.94
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	72.95	71.58
AT5G65140.1	Thale cress	plastid	71.86	71.08
PGSC0003DMT400053144	Potato	plastid	73.22	69.43
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	52.19	68.21
Solyc05g051880.2.1	Tomato	plastid	51.91	67.86
AT5G10100.1	Thale cress	plastid	69.95	67.37
Bra024359.1-P	Field mustard	plastid	61.75	67.26
CDY08815	Canola	plastid	66.12	66.67
CDY31283	Canola	plastid	67.21	65.6
Bra031879.1-P	Field mustard	plastid	67.21	64.91
Bra009057.1-P	Field mustard	plastid	65.3	64.25
KRH30218	Soybean	plastid	37.16	63.55
KRH49582	Soybean	mitochondrion	49.18	63.16
GSMUA_AchrUn_...	Banana	peroxisome	64.21	63.0
KRH18894	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	62.84	61.83
GSMUA_Achr6P30350_001	Banana	plastid	60.38	61.73
GSMUA_Achr10P...	Banana	plastid	61.48	60.81
KRH16701	Soybean	cytosol, mitochondrion, peroxisome, plastid	62.3	60.16
KRH62370	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	60.93	60.11
KRH53087	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	61.75	59.47
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	60.66	59.2
GSMUA_Achr10P...	Banana	plastid	64.75	58.66
KRG98938	Soybean	plastid	21.31	53.79
CDY14544	Canola	endoplasmic reticulum, plasma membrane	66.67	53.74
KRH04085	Soybean	nucleus, plastid	51.91	52.49
KRH23805	Soybean	cytosol	53.01	49.87
KRH39976	Soybean	peroxisome	52.73	49.61
KRH62612	Soybean	cytosol	51.37	49.21
KRH06490	Soybean	cytosol	41.8	48.88
KRH56343	Soybean	cytosol	51.64	48.21
KRH64499	Soybean	golgi, mitochondrion	44.26	44.14
KRH53451	Soybean	golgi, vacuole	43.44	43.32
OQU89414	Sorghum	cytosol	18.31	39.65
KRH38605	Soybean	cytosol	44.54	31.53

Protein Annotations

EntrezGene:100788735	MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	EMBL:ACUP02004849	EnsemblPlantsGene:GLYMA_08G137500
GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005975	GO:GO:0005992	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	UniProt:I1KT40	InterPro:IPR023214	EnsemblPlants:KRH43210	ProteinID:KRH43210
ProteinID:KRH43210.1	ProteinID:KRH43211.1	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF18	SUPFAM:SSF56784
TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI0002338733	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:10519916..10522864

Molecular Weight (calculated)

41475.0 Da

IEP (calculated)

9.553

GRAVY (calculated)

-0.476

Length

366 amino acids

Sequence
(BLAST)

001: MTQNAIVSKT KSGIKGDIAV AQKPLAAPPP PGYIPIPRRR VLKNLEINGG QRINAWVDSM RASSPTNSKS TSSLAEEHSS WILRHPSALD MFEQIMDASR
101: GKQIVMFLDY DGTLSPIVDD PDHAFMSDSM RRTVRKLARC FPTAIVTGRC KDKVYSFVRL AELYYAGSHG MDIQGPTRDC KYSKDKGEPV LFQPASEFLP
201: MIDEVHHQLV EKMKSIPGAK VENNKFCCSV HFRCVDEKKW SELAQEVRSV LKEYPKLRLN QGRKVLEIRP SIKWDKGKAL EFLLESLGFA NCNDVFPVYI
301: GDDKTDEDAF KKLRDRGQGS GILVSKFPKD TSASYSLQEP NEVMDFLQRL VEWKQVSLRL RTRSRV

Best Arabidopsis Sequence Match ( AT5G65140.1 )
(BLAST)

001: MVSQNVVVSD AKTGIITVST VSNSSVFTPT AQKPPTAPGY ISVSKKKLLK NLEINGADQS QRLNSWVDSM RASSPTHLKS LSSFSSEEEH NSWIKRHPSA
101: LNMFERIIEE ARGKQIVMFL DYDGTLSPIV DDPDRAFMTS KMRRTVKKMA KCFPTSIVTG RCIDKVYSFV KLAELYYAGS HGMDIKGPTK GFSRYNKDKP
201: SVLYQPAGDF LPMIDEVYKQ LVEKTKSTPG AKVENNKFCL SVHFRCVDEK KWSELASKVR SVVKNYPTLK LSQGRKVFEI RPIIKWNKGK ALEFLLESLG
301: FENCNDVFPI YIGDDKTDED AFKLLRGRGQ GFGILVSKFP KDTSASYSLQ DPPEVMNFLG RLVEWKQMQQ

Arabidopsis Description

TPPJProbable trehalose-phosphate phosphatase J [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ05]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.