CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

nucleus 1
plastid 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08815	Canola	plastid	76.87	96.14
Bra024359.1-P	Field mustard	plastid	70.48	95.24
CDY31283	Canola	plastid	75.77	91.73
AT5G65140.1	Thale cress	plastid	69.38	85.14
KRH26019	Soybean	cytosol	15.42	73.68
PGSC0003DMT400056161	Potato	cytosol	33.7	71.5
KRH31279	Soybean	plastid	55.07	68.87
KRG97593	Soybean	plastid	54.63	67.95
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	47.36	67.82
CDY70318	Canola	mitochondrion	34.36	66.95
KRH75558	Soybean	cytosol, extracellular, peroxisome	9.69	66.67
KRH43210	Soybean	cytosol, nucleus, peroxisome	53.74	66.67
VIT_00s0304g00080.t01	Wine grape	cytosol, peroxisome	53.96	65.68
KRH59366	Soybean	plastid	52.2	65.47
PGSC0003DMT400053144	Potato	plastid	54.63	64.25
Solyc05g051880.2.1	Tomato	plastid	39.21	63.57
CDY15842	Canola	cytosol	46.92	63.02
CDY39454	Canola	cytosol	33.26	62.66
CDY63411	Canola	cytosol	46.7	62.54
CDX90361	Canola	cytosol, peroxisome, plastid	48.68	62.43
CDY22393	Canola	cytosol	49.78	60.92
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	37.22	60.79
CDY26849	Canola	mitochondrion	30.4	59.23
CDX72676	Canola	mitochondrion	49.12	58.53
GSMUA_Achr6P30350_001	Banana	plastid	45.15	57.26
GSMUA_AchrUn_...	Banana	peroxisome	46.48	56.57
CDY14635	Canola	plastid	45.81	55.17
CDX87477	Canola	plastid	45.81	55.03
CDY26848	Canola	plastid	45.59	54.62
CDX88416	Canola	plastid	45.15	54.23
GSMUA_Achr10P...	Banana	plastid	44.05	54.05
GSMUA_Achr10P...	Banana	plastid	46.92	52.72
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	42.29	51.2
CDX94101	Canola	cytosol	10.79	48.51
CDY66417	Canola	plastid	37.89	45.38
CDY56658	Canola	plastid	37.67	45.12
CDX94103	Canola	nucleus	35.68	44.75
CDX98760	Canola	nucleus	35.68	44.75
CDY00477	Canola	plastid	37.44	44.04
CDX99919	Canola	plastid	37.44	43.93
CDX82953	Canola	plastid	35.9	43.47
CDX79165	Canola	plastid	35.9	43.47
CDX90831	Canola	mitochondrion	5.95	37.5
CDY37091	Canola	plastid	21.37	37.31
OQU89414	Sorghum	cytosol	13.66	36.69
CDX98758	Canola	cytosol, nucleus, peroxisome	11.23	34.0
KRH38605	Soybean	cytosol	34.14	29.98

Protein Annotations

MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	GO:A0A078FNU0	UniProt:A0A078FNU0	EnsemblPlants:CDY14544
ProteinID:CDY14544	ProteinID:CDY14544.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805	GO:GO:0005575
GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016311	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00079269001	InterPro:HAD-SF_hydro_IIB
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF18
SUPFAM:SSF56784	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	TMHMM:TMhelix	InterPro:Trehalose_PPase	UniParc:UPI0004EE2ADF
SEG:seg	:	:	:	:	:

Description

BnaC03g49150DTrehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A078FNU0]

Coordinates

chrLK032044:-:370347..372763

Molecular Weight (calculated)

50690.3 Da

IEP (calculated)

9.333

GRAVY (calculated)

-0.194

Length

454 amino acids

Sequence
(BLAST)

001: MAPTCNETLS LSLSISHQVL CIYISHLLVT AFLPHYLSRL FEHCKTTKSI IRIILVPSPL FYIFFYKMVS QNVVVPDATT GIITVSTVSN SSVFTPSAQK
101: PPTAPGHISI SKKKLLKSLE ISGDQSQRLN SWVDSMRASS PTHLKSLPSL SSQEELNSWM KRHPSALDMF ERITEASRGK EIVMFLDYDG TLSPIVADPD
201: RAFISSKMRR TVKKLAKCFP TSIVTGRCID KVYSFVKLAE LYYAGSHGMD IKGPTKGFSR YNKDKPSVLY QPAGDFLPMI DEAFKQLVEK TKSTPGAKVE
301: NNKFCLSVHF RCVDEKKWSE LALKVRSVVK NYPTLKLSQG RKVFEIRPMV KWDKGKALEF LLESLGFDNS SDVFPIYIGD DRTDEDAFKL LQERGQGLGL
401: LVTKFPKDTN ASYSLQDPLE ASDGFPATVG GVETSSAMNT KGPMEFFSIN NHCP

Best Arabidopsis Sequence Match ( AT5G65140.1 )
(BLAST)

001: MVSQNVVVSD AKTGIITVST VSNSSVFTPT AQKPPTAPGY ISVSKKKLLK NLEINGADQS QRLNSWVDSM RASSPTHLKS LSSFSSEEEH NSWIKRHPSA
101: LNMFERIIEE ARGKQIVMFL DYDGTLSPIV DDPDRAFMTS KMRRTVKKMA KCFPTSIVTG RCIDKVYSFV KLAELYYAGS HGMDIKGPTK GFSRYNKDKP
201: SVLYQPAGDF LPMIDEVYKQ LVEKTKSTPG AKVENNKFCL SVHFRCVDEK KWSELASKVR SVVKNYPTLK LSQGRKVFEI RPIIKWNKGK ALEFLLESLG
301: FENCNDVFPI YIGDDKTDED AFKLLRGRGQ GFGILVSKFP KDTSASYSLQ DPPEVMNFLG RLVEWKQMQQ

Arabidopsis Description

TPPJProbable trehalose-phosphate phosphatase J [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ05]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.