Factsheet for VIT_00s0304g00080.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome

Predictor Summary:

nucleus 1
peroxisome 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, vacuole
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	vacuole
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g054930.2.1	Tomato	cytosol, peroxisome, plastid	67.56	79.5
PGSC0003DMT400056161	Potato	cytosol	45.04	78.5
KRH26019	Soybean	cytosol	19.84	77.89
KRH31279	Soybean	plastid	73.73	75.76
CDY70318	Canola	mitochondrion	47.19	75.54
KRG97593	Soybean	plastid	73.46	75.07
GSMUA_Achr9P12940_001	Banana	cytosol, peroxisome, plastid	55.76	74.82
PGSC0003DMT400053144	Potato	plastid	77.21	74.61
KRH75558	Soybean	cytosol, extracellular, peroxisome	13.14	74.24
KRH59366	Soybean	plastid	71.85	74.03
KRH43210	Soybean	cytosol, nucleus, peroxisome	71.58	72.95
VIT_18s0001g05300.t01	Wine grape	plastid	73.19	72.8
Bra011835.1-P	Field mustard	cytosol	64.61	69.86
AT5G65140.1	Thale cress	plastid	68.63	69.19
Bra010658.1-P	Field mustard	cytosol	63.81	68.99
Solyc05g051880.2.1	Tomato	plastid	51.74	68.93
AT4G39770.1	Thale cress	cytosol	63.81	68.19
AT2G22190.1	Thale cress	cytosol, nucleus, peroxisome	64.61	68.08
CDX90361	Canola	cytosol, peroxisome, plastid	64.08	67.51
Bra024359.1-P	Field mustard	plastid	60.32	66.96
CDY08815	Canola	plastid	64.88	66.67
CDY15842	Canola	cytosol	60.32	66.57
Bra030256.1-P	Field mustard	cytosol	60.32	66.57
CDY63411	Canola	cytosol	60.32	66.37
Bra006047.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	49.6	66.07
AT5G10100.1	Thale cress	plastid	67.29	66.05
CDY31283	Canola	plastid	65.68	65.33
CDY39454	Canola	cytosol	41.82	64.73
Bra031879.1-P	Field mustard	plastid	65.68	64.64
GSMUA_AchrUn_...	Banana	peroxisome	64.61	64.61
GSMUA_Achr6P30350_001	Banana	plastid	61.66	64.25
CDY22393	Canola	cytosol	63.54	63.88
Bra033634.1-P	Field mustard	cytosol	63.54	63.88
GSMUA_Achr10P...	Banana	plastid	63.27	63.78
Bra009057.1-P	Field mustard	plastid	62.47	62.63
CDX72676	Canola	mitochondrion	62.47	61.15
GSMUA_Achr4P01810_001	Banana	cytosol, peroxisome, plastid	60.32	60.0
GSMUA_Achr10P...	Banana	plastid	64.88	59.9
VIT_15s0046g01000.t01	Wine grape	cytosol, nucleus, peroxisome	42.09	54.33
VIT_00s0233g00030.t01	Wine grape	nucleus, peroxisome, plastid	57.1	54.2
VIT_16s0022g00660.t01	Wine grape	plastid	55.76	54.03
CDY14544	Canola	endoplasmic reticulum, plasma membrane	65.68	53.96
VIT_02s0154g00110.t01	Wine grape	nucleus, peroxisome, plastid	56.57	53.69
VIT_16s0050g02600.t01	Wine grape	mitochondrion	45.31	49.56
VIT_11s0037g00720.t01	Wine grape	nucleus	14.75	49.55
OQU89414	Sorghum	cytosol	17.96	39.65
KRH38605	Soybean	cytosol	43.97	31.72

Protein Annotations

EntrezGene:100258773	wikigene:100258773	MapMan:3.3.2	Gene3D:3.30.70.1020	Gene3D:3.40.50.1000	ProteinID:CCB62872
ProteinID:CCB62872.1	UniProt:F6I7F4	EMBL:FN596780	GO:GO:0003674	GO:GO:0003824	GO:GO:0004805
GO:GO:0005975	GO:GO:0005992	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016311	GO:GO:0016787	InterPro:HAD-SF_hydro_IIB	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
EntrezGene:LOC100258773	wikigene:LOC100258773	PFAM:PF02358	PANTHER:PTHR43768	PANTHER:PTHR43768:SF1	SUPFAM:SSF56784
TIGR:TC54643	TIGRFAMs:TIGR00685	TIGRFAMs:TIGR01484	InterPro:Trehalose_PPase	UniParc:UPI000210ABDA	ArrayExpress:VIT_00s0304g00080
EnsemblPlantsGene:VIT_00s0304g00080	EnsemblPlants:VIT_00s0304g00080.t01	unigene:Vvi.10535	RefSeq:XP_002263078	RefSeq:XP_002263078.1	:

Description

Trehalose 6-phosphate phosphatase [Source:UniProtKB/TrEMBL;Acc:F6I7F4]

Coordinates

chrUn:-:22456140..22459197

Molecular Weight (calculated)

42033.9 Da

IEP (calculated)

10.015

GRAVY (calculated)

-0.302

Length

373 amino acids

Sequence
(BLAST)

001: SLIGERAEMT RQNVVVADSK SGINVAITMT VSNSSLFTKA VQKTRETQGG CINIPPKKVG GGARINAWVD SMRASSPTRV KSAASLSDQN SWMLRHPSAL
101: NMFEQIIEAS KGKQIVMFLD YDGTLSPIVD DPDRAFMSDA MRAAVRQLAR YFPTAIVSGR CRDKVYNFVR LAELYYAGSH GMDIKGPAKG SKYKKETKAV
201: LFQPASEFLP MIDEVYKALL EKTKSIPGAS VEHNKFCLSV HYRCVDEKKW SILAQQVRSV LQQYPKLRLT QGRKVLEIRP TIKWDKGKAL EFLLESLGFG
301: NCTDVFPVYI GDDRTDEDAF KILRDRGQGF GILVSKIPKD TSASYSLQEP LEVMYFLQRL VEWKRLSMRQ YRV

Best Arabidopsis Sequence Match ( AT5G65140.1 )
(BLAST)

001: MVSQNVVVSD AKTGIITVST VSNSSVFTPT AQKPPTAPGY ISVSKKKLLK NLEINGADQS QRLNSWVDSM RASSPTHLKS LSSFSSEEEH NSWIKRHPSA
101: LNMFERIIEE ARGKQIVMFL DYDGTLSPIV DDPDRAFMTS KMRRTVKKMA KCFPTSIVTG RCIDKVYSFV KLAELYYAGS HGMDIKGPTK GFSRYNKDKP
201: SVLYQPAGDF LPMIDEVYKQ LVEKTKSTPG AKVENNKFCL SVHFRCVDEK KWSELASKVR SVVKNYPTLK LSQGRKVFEI RPIIKWNKGK ALEFLLESLG
301: FENCNDVFPI YIGDDKTDED AFKLLRGRGQ GFGILVSKFP KDTSASYSLQ DPPEVMNFLG RLVEWKQMQQ

Arabidopsis Description

TPPJProbable trehalose-phosphate phosphatase J [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ05]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.